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Status |
Public on Jul 03, 2019 |
Title |
Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA-Seq] |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
To understand the molecular differences between adipocytes and their contribution to cell-type specific function, we comprehensively characterised the transcriptomes and DNA methylomes using WGBS of isolated adipocytes from the SAT and VAT from normal weight individuals
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Overall design |
WGBS, RNA-seq, and microarrays were used to study epigenetics and transcriptomics human cancer isolated subcutaneous (abdominal - SA) and vieceral (omental - VA) adipocyte, peripheral blood leukocytes (PBL) and visceral adipose tissue (VAT).
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Contributor(s) |
Bradford ST |
Citation(s) |
31266983 |
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Submission date |
Feb 20, 2018 |
Last update date |
Jul 26, 2019 |
Contact name |
Stephen Bradford |
Organization name |
Garvan Institute of Medical Research
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Street address |
384 Victoria St
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City |
Darlinghurst |
State/province |
NSW |
ZIP/Postal code |
2010 |
Country |
Australia |
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Platforms (1) |
GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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Samples (6)
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This SubSeries is part of SuperSeries: |
GSE110821 |
Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes |
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Relations |
BioProject |
PRJNA434654 |
SRA |
SRP133095 |