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GEO accession:
Series GSE109901
Query DataSets for GSE109901
Status
Public on Jun 29, 2018
Title
Facultative dosage compensation of developmental genes on autosomes in Drosophila and mammals
Organisms
Drosophila melanogaster
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
31601616
Submission date
Jan 30, 2018
Last update date
Nov 25, 2019
Contact name
Asifa Akhtar
E-mail(s)
[email protected]
Organization name
Max Planck Institute of Immunobiology and Epigenetics
Department
Chromatin Regulation
Lab
Akhtar Lab
Street address
Stuebeweg 51
City
Freiburg
ZIP/Postal code
79108
Country
Germany
Platforms (4)
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GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL19132
Illumina NextSeq 500 (Drosophila melanogaster)
GPL21493
Illumina HiSeq 3000 (Mus musculus)
GPL23323
Illumina HiSeq 3000 (Drosophila melanogaster)
Samples (69)
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GSM2973438
mESC_Msl2KO_H3_ChIP
GSM2973439
mESC_Msl2KO_H4K16ac_ChIP
GSM2973440
mESC_WT_H3_ChIP
GSM2973441
mESC_WT_H4K16ac_ChIP
GSM2973442
Dmel_female_H3K36me3_ChIP
GSM2973443
Dmel_female_H3_ChIP
GSM2973444
Dmel_female_H3_H4K16ac_Input
GSM2973445
Dmel_female_H3ac_ChIP
GSM2973446
Dmel_female_H4K16ac_ChIP
GSM2973447
Dmel_female_H4_ChIP
GSM2973448
Dmel_female_H4ac_ChIP
GSM2973449
Dmel_female_MLE_ChIP
GSM2973450
Dmel_female_MLE_Input
GSM2973451
Dmel_female_MSL2Flag_ChIP
GSM2973452
Dmel_female_MSL2Flag_Input
GSM2973453
Dmel_female_UntaggedFlag_ChIP
GSM2973454
Dmel_female_UntaggedFlag_Input
GSM2973455
Dmel_female_msl2het_H3_ChIP
GSM2973456
Dmel_female_msl2het_H3_H4K16ac_Input
GSM2973457
Dmel_female_msl2het_H4K16ac_ChIP
GSM2973458
Dmel_female_msl2null_H3_ChIP
GSM2973459
Dmel_female_msl2null_H3_H4K16ac_Input
GSM2973460
Dmel_female_msl2null_H4K16ac_ChIP
GSM2973461
Dmel_male_H3K36me3_ChIP
GSM2973462
Dmel_male_H3_ChIP
GSM2973463
Dmel_male_H3_H4K16ac_Input
GSM2973464
Dmel_male_H3ac_ChIP
GSM2973465
Dmel_male_H4K16ac_ChIP
GSM2973466
Dmel_male_H4_ChIP
GSM2973467
Dmel_male_H4ac_ChIP
GSM2973468
Dmel_male_MLE_ChIP
GSM2973469
Dmel_male_MLE_Input
GSM2973470
Dmel_male_MSL2Flag_ChIP
GSM2973471
Dmel_male_MSL2Flag_Input
GSM2973472
Dmel_male_UntaggedFlag_ChIP
GSM2973473
Dmel_male_UntaggedFlag_Input
GSM2973474
Dmel_male_msl2het_H3_ChIP
GSM2973475
Dmel_male_msl2het_H3_H4K16ac_Input
GSM2973476
Dmel_male_msl2het_H4K16ac_ChIP
GSM2973477
Dmel_male_msl2null_H3_ChIP
GSM2973478
Dmel_male_msl2null_H3_H4K16ac_Input
GSM2973479
Dmel_male_msl2null_H4K16ac_ChIP
GSM2973480
Msl2KO_A2_2i_rep1
GSM2973481
Msl2KO_A2_2i_rep2
GSM2973482
Msl2KO_A2_2i_rep3
GSM2973483
Msl2KO_A2_Serum_rep1
GSM2973484
Msl2KO_A2_Serum_rep2
GSM2973485
Msl2KO_A2_Serum_rep3
GSM2973486
Msl2KO_A2_Serum_rep4
GSM2973487
Msl2KO_D12_2i_rep1
GSM2973488
Msl2KO_D12_2i_rep2
GSM2973489
Msl2KO_D12_2i_rep3
GSM2973490
Msl2KO_D12_Serum_rep1
GSM2973491
Msl2KO_D12_Serum_rep2
GSM2973492
Msl2KO_D12_Serum_rep3
GSM2973493
Msl2KO_D12_Serum_rep4
GSM2973494
WT_MF_2i_rep1
GSM2973495
WT_MF_2i_rep2
GSM2973496
WT_MF_2i_rep3
GSM2973497
WT_MF_Serum_rep1
GSM2973498
WT_MF_Serum_rep2
GSM2973499
WT_MF_Serum_rep3
GSM2973500
WT_MF_Serum_rep4
GSM2973501
Dmel_female_MLE
GSM2973502
Dmel_female_MSL2
GSM2973503
Dmel_female_WOR
GSM2973504
Dmel_male_MLE
GSM2973505
Dmel_male_MSL2
GSM2973506
Dmel_male_WOR
This SuperSeries is composed of the following SubSeries:
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GSE109897
Facultative dosage compensation of developmental genes on autosomes in Drosophila and mammals [ChIP-seq mouse]
GSE109898
Facultative dosage compensation of developmental genes on autosomes in Drosophila and mammals [ChIP-seq Dmel]
GSE109899
Facultative dosage compensation of developmental genes on autosomes in Drosophila and mammals [RNA-seq mouse]
GSE109900
Facultative dosage compensation of developmental genes on autosomes in Drosophila and mammals [RIP-seq]
Relations
BioProject
PRJNA432263
Download family
Format
SOFT formatted family file(s)
SOFT
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MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE109901_RAW.tar
4.8 Gb
(http)
(custom)
TAR (of BW)
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