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Series GSE104790 Query DataSets for GSE104790
Status Public on Jun 01, 2018
Title Hemogenic endothelial fate mapping reveals dual developmental origin of mast cells.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Hematopoiesis occurs in distinct waves. ‘Definitive’ hematopoietic stem cells (HSC) with the potential for all blood lineages emerge in the aorta-gonado-mesonephros (AGM), while ‘primitive’ progenitors, whose potential is thought to be limited to erythrocytes, megakaryocytes and macrophages (MΦ), arise earlier in the yolk sac (YS). Here, we questioned whether other YS lineages exist that have not been identified, partially owing to limitations of current lineage tracing models. We established the use of Cdh5CreERT2 for hematopoietic fate mapping, which revealed the YS origin of mast cells (MC). YS derived MC are replaced by definitive MC, which maintain themselves independently from the BM in the adult. Replacement occurs with tissue specific kinetics. MC in the skin, but not other organs, remain largely YS derived prenatally and are phenotypically and transcriptomically distinct from definite adult MC. We conclude that dual hematopoietic origin is not MΦ specific, but shared between these two myeloid lineages.
 
Overall design RNAsequencing of YS HE derived embryonic (E16.5) and definitive adult skin MC. 3 replicates for each population.
 
Contributor(s) Gentek R, Bajénoff M
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Submission date Oct 10, 2017
Last update date May 15, 2019
Contact name jinmiao chen
E-mail(s) [email protected]
Organization name Singapore Immunology Network
Street address 8A Biomedical Grove, #04-06 Immunos
City Singapore
ZIP/Postal code 138648
Country Singapore
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (6)
GSM2807947 PRIM1
GSM2807948 PRIM2
GSM2807949 PRIM3
Relations
BioProject PRJNA413826
SRA SRP119696

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Supplementary file Size Download File type/resource
GSE104790_gene_readCount.txt.gz 2.7 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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