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Status
Public on Aug 14, 2007
Title
Agilent-015366 Custom Human 244K CGH Microarray
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Agilent Custom Human 244K CGH Microarray consisting of 60-mer oligonucleotides mapped to human genome build 35. Reference: de Smith et al, Human Molecular Genetics, 2007
Contributor(s)
de Smith A , Tsalenko A , Sampas N , Scheffer A , Yamada A , Tsang P , Ben-Dor A , Yakhini Z , Ellis R , Bruhn L , Laderman S , Froguel P , Blakemore A Submission date
Jul 31, 2007
Last update date
Aug 21, 2007
Contact name
Alicia Scheffer
Organization name
Agilent Technologies
Street address
5301 Stevens Creek Blvd.
City
Santa Clara
State/province
CA
ZIP/Postal code
95051
Country
USA
Samples (57)
GSM214509 , GSM214532 , GSM214533 , GSM214676 , GSM214677 , GSM214678
GSM214679 ,
GSM214680 ,
GSM214681 ,
GSM214682 ,
GSM214683 ,
GSM214684 ,
GSM214685 ,
GSM214686 ,
GSM214687 ,
GSM214688 ,
GSM214689 ,
GSM214690 ,
GSM214691 ,
GSM214692 ,
GSM214693 ,
GSM214694 ,
GSM214695 ,
GSM214696 ,
GSM214697 ,
GSM214698 ,
GSM214699 ,
GSM214700 ,
GSM214701 ,
GSM214702 ,
GSM214703 ,
GSM214704 ,
GSM214705 ,
GSM214706 ,
GSM215008 ,
GSM215009 ,
GSM215010 ,
GSM215011 ,
GSM215012 ,
GSM215033 ,
GSM215034 ,
GSM215035 ,
GSM215036 ,
GSM215037 ,
GSM215042 ,
GSM215043 ,
GSM215044 ,
GSM215045 ,
GSM215046 ,
GSM215047 ,
GSM215048 ,
GSM215049 ,
GSM215050 ,
GSM215407 ,
GSM215408 ,
GSM215409 ,
GSM215410 Series (1)
GSE8691 Array CGH analysis of copy number variation identifies 1284 new genes variant in healthy white males
Data table header descriptions ID Col Column
Row Row
ProbeUID Probe identifier
ControlType Control type
ProbeName Probe Name
SystematicName Systematic Name
SEQUENCE SPOT_ID GB_RANGE NCBI Build 35.1 Accession.Version[start..end]
Data table ID Col Row ProbeUID ControlType ProbeName SystematicName SEQUENCE SPOT_ID GB_RANGE 1
1
1
0
1
HsCGHBrightCorner
HsCGHBrightCorner
HsCGHBrightCorner
2
2
1
1
1
DarkCorner
DarkCorner
DarkCorner
3
3
1
1
1
DarkCorner
DarkCorner
DarkCorner
4
4
1
3
0
A_16_P00000192
chr1:000968666-000968710
TTTCATTGCTGCCTCCACATGGAGATGGCATTTGCCCCAAGGATT
NC_000001.8[000968666..000968710]
5
5
1
5
0
A_16_P17622755
hs|chr6:089244566-089244625
CTACTCTGGGAAATCTATAGATTGAGGCAAATAATCAGAACCTTTTATCAAGCACATGGG
NC_000006.9[089244566..089244625]
6
6
1
7
0
A_16_P35400220
chr1:186515343-186515402
AAACATGTTTCTGTCTTCTTTCAGTTTTTTGCCATAGTAAAGTCTGAAAGGTAACCTGGA
NC_000001.8[186515343..186515402]
7
7
1
9
0
A_16_P20378590
chr16:001844057-001844110
ATAACTACAGGGATTTCACAGTTTGGAACAGACATCGGTGTTTACCATGTCATC
NC_000016.8[001844057..001844110]
8
8
1
11
0
A_16_P18467407
chr8:122728830-122728889
ATGTGAAGAGACGGAGATCTAAGCATTTATCAGACACTCAAGAAATTGGAATGAACAGAT
NC_000008.9[122728830..122728889]
9
9
1
13
0
A_16_P01721715
chr7:064294989-064295048
ACTTATAAACCTTCTCTACTTGTGCTTTTCCTCCCTAATGAGTTTGTTTTAACTACTGTA
NC_000007.11[064294989..064295048]
10
10
1
15
0
A_16_P02298363
chr10:079043942-079044001
AGTGCCCAAAATATAAATGTAACCAGTGTGGAGTATTAGTCAATTCATCAGCAAGAGGTT
NC_000010.8[079043942..079044001]
11
11
1
17
0
A_16_P37850752
hs|chr6:151882964-151883023
TGATTGACCTGTAGAATGGATGTTAGGAAACTCAAAATTGAACACAGTGAAACAAATGGT
NC_000006.9[151882964..151883023]
12
12
1
19
0
A_16_P16231991
chr3:055162497-055162556
AACAACTGATCTTAGGTGGAAGGGATTTAATAGACCCGATACTCATCCTATACACTGTAG
NC_000003.9[055162497..055162556]
13
13
1
21
0
A_16_P02380114
chr11:001432964-001433014
GTTAGGAGGAGCAGAAAGGCCCTAAAAGCCTCAAATGGAGAAAGTTTATTG
NC_000011.8[001432964..001433014]
14
14
1
23
0
A_16_P15310947
chr1:155598450-155598509
GCACTGCCAATTCTACTGATCCACATGAAAAAATGTGAGGTATATGTAAAACTAGGCATG
NC_000001.8[155598450..155598509]
15
15
1
25
0
A_16_P02042521
chr8:144374639-144374698
ACCGAAAATCCTGTCATTGCAACTTTAAAATAGAAGTTTCATTTTGCTCCCGTAAAGAGA
NC_000008.9[144374639..144374698]
16
16
1
27
0
A_16_P40585959
chr16:022899923-022899980
CTCTCTTCCTCTTTAGTCATCCCAACTGAGGTGAGAGACATTCTAAAAACTGAGATTT
NC_000016.8[022899923..022899980]
17
17
1
29
0
A_16_P18855498
chr10:019822801-019822860
GTAAGGAATTAATTTCAATGGAAGACTCTAAAACGTGTGAAATCACCATTTTCCCCACAA
NC_000010.8[019822801..019822860]
18
18
1
31
0
A_16_P21287739
chr22:021026512-021026571
TCTAGGCTGATGATCCTAACTATTCATTTACAGCACATTGTCATATAAAGGCCAGCGATA
NC_000022.8[021026512..021026571]
19
19
1
33
0
A_16_P02027414
chr8:134033272-134033331
TTAAATTCTAACTACAGCGTGAAGAACTGATAGATACCCTTTTCTAACAACAGATATTGA
NC_000008.9[134033272..134033331]
20
20
1
35
0
A_16_P40163191
chr14:040978001-040978060
GCAGAGAAAGATTAATACATGACTGTGAACAGGAATTATCTGTTCTTACCTATCGACCGA
NC_000014.7[040978001..040978060]
243504 36895 Kbytes .Supplementary data files not provided
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