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Platform GPL5110 Query DataSets for GPL5110
Status Public on Apr 20, 2007
Title University of Pennsylvania/Nathanson Lab_HomoSapiens_4798 unique BACS_FGA72904
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Manufacturer Weber Laboratory/School of Medicine/University of Pennsylvania
Manufacture protocol This BAC array platform consisted of 4798 unique BACs spotted in-house on CorningCMT Ultra-Gap slides (Corning, USA) using two replicates printed on each slide. Details of array construction are described elsewhere (Greshock et al., 2004)
Greshock J, Naylor TL, Margolin A, Diskin S, Cleaver SH, Futreal PA, deJong PJ, Zhao S, Liebman M, Weber BL. 2004. 1-Mb resolution array-based comparative genomic hybridization using a BAC clone set optimized for cancer gene analysis. Genome Res 14(1):179-87.
Support glass
Coating other
 
Description ULTRA GAPS (Gama Amino Propyl Silane)
 
Web link http://www.genome.org/cgi/content/abstract/14/1/179
Citation(s) 14672980
Submission date Apr 19, 2007
Last update date Feb 05, 2008
Contact name Carmen Elisa Oquendo
E-mail(s) [email protected]
Organization name University of Pennsylvania
Street address 421 Curie Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19119
Country USA
 

Data table header descriptions
ID
Block Replicate A
Block Replicate B
Row
Column
Chromosome
Start
End
Mapping Method
CLONE_ID

Data table
ID Block Replicate A Block Replicate B Row Column Chromosome Start End Mapping Method CLONE_ID
CTB-185C18 1 2 7 15 chr12 72,604,712 72,701,032 BAC_end_UCSC_Hg18_NCBI36.1 CTB-185C18
CTB-97E14 1 2 8 1 chr7 125,674,770 125,817,431 UCSC_FISH_Mapped_Hg18_NCBI36.1 CTB-97E14
CTC-361L6 1 2 7 16 chr7 124,155,340 124,291,179 BAC_end_UCSC_Hg18_NCBI36.1 CTC-361L6
CTD-2011F17 1 2 12 8 chr11 75,385,351 75,551,085 BAC_end_UCSC_Hg18_NCBI36.1 CTD-2011F17
CTD-2015K9 1 2 12 12 chr15 63,045,884 63,174,699 BAC_end_UCSC_Hg18_NCBI36.1 CTD-2015K9
CTD-2310E18 1 2 6 18 chr9 97,547,482 97,686,781 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2310E18
CTD-2313B23 1 2 7 3 chr6 37,225,288 37,332,359 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2313B23
CTD-2325F13 1 2 6 19 chr12 69,321,192 69,424,913 BAC_end_UCSC_Hg18_NCBI36.1 CTD-2325F13
CTD-2327O11 1 2 7 4 chr17 26,255,442 26,358,471 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2327O11
CTD-2348L12 1 2 7 18 chr9 120,937,605 121,077,534 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2348L12
CTD-2373A22 1 2 12 6 chr5 2,392,913 2,483,531 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2373A22
CTD-2383N10 1 2 12 3 chr8 4,383,871 4,480,788 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2383N10
CTD-2386O23 1 2 12 7 chr7 11,041,847 11,213,261 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2386O23
CTD-2521K2 1 2 11 17 chr1 67,786,693 67,972,809 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2521K2
CTD-2535L15 1 2 11 14 chr3 41,181,223 41,354,724 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2535L15
CTD-2540N7 1 2 11 18 chr2 129,048,326 129,221,678 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2540N7
CTD-2556F17 1 2 12 4 chr14 101,400,205 101,564,090 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2556F17
CTD-2587A7 1 2 12 1 chr2 183,214,942 183,370,988 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2587A7
CTD-2589J22 1 2 12 5 chr3 80,594,130 80,752,249 Sanger_BAC_end_Hg18_NCBI36.1 CTD-2589J22
GS1-74E4 1 2 7 19 chr7 119,553,835 119,554,475 UCSC_FISH_Mapped_Hg18_NCBI36.1 GS1-74E4

Total number of rows: 4798

Table truncated, full table size 413 Kbytes.




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