GEO help: Mouse over screen elements for information.
Status
Public on Jan 25, 2007
Title
NimbleGen_1500b_Promoter_Array
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
NimbleGen Systems Inc
Manufacture protocol
CHIP_Protocol decribes the process for immunoprecipitation and amplification by WGA (Sigma) of samples derived from cultured eukarotic cells.
Contributor(s)
Jin VX , O'Geen H , Iyengar S , Green R , Farnham PJ Submission date
Nov 28, 2006
Last update date
Jan 18, 2013
Contact name
Victor X Jin
E-mail(s)
[email protected] Phone
614-2926931
Organization name
OSU Medical Center
Department
Biomedical Informatics
Street address
333 West 10th Ave
City
Columbus
State/province
OH
ZIP/Postal code
43210
Country
USA
Samples (50)
GSM147819 , GSM147821 , GSM147822 , GSM147823 , GSM180971 , GSM180972
GSM215038 ,
GSM215342 ,
GSM215343 ,
GSM215373 ,
GSM215393 ,
GSM215394 ,
GSM215395 ,
GSM215396 ,
GSM215397 ,
GSM215398 ,
GSM215399 ,
GSM215400 ,
GSM215401 ,
GSM215402 ,
GSM215403 ,
GSM215404 ,
GSM215405 ,
GSM215406 ,
GSM215571 ,
GSM215603 ,
GSM215604 ,
GSM215605 ,
GSM215606 ,
GSM215607 ,
GSM215608 ,
GSM215609 ,
GSM215610 ,
GSM215611 ,
GSM215612 ,
GSM215613 ,
GSM215614 ,
GSM215615 ,
GSM215616 ,
GSM215617 ,
GSM215618 ,
GSM215625 ,
GSM215653 ,
GSM245270 ,
GSM245271 ,
GSM245272 ,
GSM245273 ,
GSM699277 ,
GSM699298 ,
GSM699321 Series (4)
GSE6409 Identify cis-regulatory modules for OCT4
GSE8716 A ChIP-chip analysis of E2F family in normal and tumor cells reveals interchangeable roles of E2F family members
GSE9568 Integrated epigenomic analyses of neuronal MeCP2 reveal a role for long-range interaction with active genes
GSE28161 L3MBTL2 protein acts in concert with PcG protein mediated monoubiquitination of H2A to establish a repressive chromatin structure [ChIP-chip data].
Data table header descriptions ID GENE_SYMBOL GenBank annotated Gene Symbol
GENE_ID GenBank annotated Gene ID
GENBANK_ACC GenBank chromosome identifier (hg17)
NG_PROMOTER NimbleGen internal promoter name within this array
CHROMOSOME chromsome number
RANGE_GB RANGE_STRAND always plus
RANGE_START startpoint in genbank chromosome
RANGE_END endpoint in genbank chromosome
Data table ID GENE_SYMBOL GENE_ID GENBANK_ACC NG_PROMOTER CHROMOSOME RANGE_GB RANGE_STRAND RANGE_START RANGE_END HSAP0406S00000003_CHR1P000009637
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9637
9687
HSAP0406S00000003_CHR1P000008427
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
8427
8627
HSAP0406S00000003_CHR1P000008707
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
8707
8757
HSAP0406S00000003_CHR1P000009597
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9597
9647
HSAP0406S00000003_CHR1P000009757
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9757
9907
HSAP0406S00000003_CHR1P000009607
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9607
9657
HSAP0406S00000003_CHR1P000009097
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9097
9147
HSAP0406S00000003_CHR1P000008677
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
8677
8727
HSAP0406S00000003_CHR1P000009617
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9617
9667
HSAP0406S00000003_CHR1P000008697
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
8697
8747
HSAP0406S00000003_CHR1P000009627
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9627
9677
HSAP0406S00000003_CHR1P000009087
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9087
9137
HSAP0406S00000003_CHR1P000008687
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
8687
8737
HSAP0406S00000003_CHR1P000009437
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
9437
9587
HSAP0406S00000003_CHR1P000008667
NA
349338
AK024481
HSAP0406S00000003
chr1
NC_000001.8
+
8667
8717
HSAP0406S00000005_CHR1P000019401
NA
375690
AK024448
HSAP0406S00000005
chr1
NC_000001.8
+
19401
19501
HSAP0406S00000005_CHR1P000019281
NA
375690
AK024448
HSAP0406S00000005
chr1
NC_000001.8
+
19281
19331
HSAP0406S00000005_CHR1P000019421
NA
375690
AK024448
HSAP0406S00000005
chr1
NC_000001.8
+
19421
19521
HSAP0406S00000005_CHR1P000019241
NA
375690
AK024448
HSAP0406S00000005
chr1
NC_000001.8
+
19241
19341
HSAP0406S00000005_CHR1P000019261
NA
375690
AK024448
HSAP0406S00000005
chr1
NC_000001.8
+
19261
19311
359384 38608 Kbytes .Supplementary data files not provided
Less...
More...