NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL4497 Query DataSets for GPL4497
Status Public on Dec 01, 2006
Title Human whole genome tiling array, chip 09 of 14
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol See manufacturer's web site
 
 
Contributor(s) Yang A, Zhu Z, Kapranov P, McKeon F, Church G, Gingeras T, Struhl K
Submission date Oct 25, 2006
Last update date Dec 01, 2006
Contact name Kevin Struhl
Organization name Harvard Medical School
Department Dept. Of Biological Chemistry & Molecular Pharmacology
Lab Struhl lab
Street address 240 Longwood Ave.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Samples (6) GSM142541, GSM142542, GSM142543, GSM142931, GSM142932, GSM142933
Series (1)
GSE6132 Whole genome mapping of p63 binding sites in ME180 human cervical carcinoma cells

Data table header descriptions
ID
SEQUENCE
Strand
Chromosome
Coordinate Genomic coordinate, NCBI Build 35
X_PM_probe
Y_PM_probe
X_MM_probe
Y_MM_probe

Data table
ID SEQUENCE Strand Chromosome Coordinate X_PM_probe Y_PM_probe X_MM_probe Y_MM_probe
10_64250029_719_1115 GTCCAGCTAGGACCCTCAGGTTGCC t chr10 64250029 719 1115 719 1116
10_64250060_1387_2133 AAAACCTGAAAATCACTCAGGAGAC t chr10 64250060 1387 2133 1387 2134
10_64250094_253_769 TGTAAATGAGAATTTCAAATCTGGG t chr10 64250094 253 769 253 770
10_64250130_1431_1093 CATCCCTCTTGGCTGATGGTGATCC t chr10 64250130 1431 1093 1431 1094
10_64250166_1056_2531 TAAATCAAAACACAAATATGAACAA t chr10 64250166 1056 2531 1056 2532
10_64250201_1506_229 TAGGTAGAGCCTATAATGATGTGCA t chr10 64250201 1506 229 1506 230
10_64250239_231_2439 CAGTATTAGTATGGAAGGGAACAAA t chr10 64250239 231 2439 231 2440
10_64250277_1200_1611 GGCAAATTCTGACCTTCTTTTGTCT t chr10 64250277 1200 1611 1200 1612
10_64250313_2227_1765 TTTGAGGTCCCCACCCTCATGAGTG t chr10 64250313 2227 1765 2227 1766
10_64250351_83_935 GATTTTCACCGAAGTGCACATGTTC t chr10 64250351 83 935 83 936
10_64250384_339_1257 CTTTAGGTGGATGGCAGAGTTGGCA t chr10 64250384 339 1257 339 1258
10_64250430_1765_1587 GAAACGTAGAGAACCATTTATCACT t chr10 64250430 1765 1587 1765 1588
10_64250466_1604_477 TAGCCTCTGGGATTACCAGATTAGT t chr10 64250466 1604 477 1604 478
10_64250502_2065_621 CAACAGTTCTGATTGGCGTAGCCTG t chr10 64250502 2065 621 2065 622
10_64250538_378_149 TGGACTGGTGCAAAGCAATGCTTTC t chr10 64250538 378 149 378 150
10_64250574_841_531 TATTTGTGCCAATGACACGTGACTT t chr10 64250574 841 531 841 532
10_64250609_2367_157 TAGATCATAGAGCTCTTATCTCCTC t chr10 64250609 2367 157 2367 158
10_64250645_623_5 CCAGTGCTGCTGCTTGTGCTGCTGC t chr10 64250645 623 5 623 6
10_64250681_1907_2175 AATATCTAAAGGGAACCTGAGCACC t chr10 64250681 1907 2175 1907 2176
10_64251084_483_583 GTATTGGCTACCTTCAGCCCCAGTG t chr10 64251084 483 583 483 584

Total number of rows: 2995629

Table truncated, full table size 242507 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap