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Platform GPL4491 Query DataSets for GPL4491
Status Public on Dec 01, 2006
Title Human whole genome tiling array, chip 03 of 14
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol See manufacturer's web site
 
 
Contributor(s) Yang A, Zhu Z, Kapranov P, McKeon F, Church G, Gingeras T, Struhl K
Submission date Oct 25, 2006
Last update date Dec 01, 2006
Contact name Kevin Struhl
Organization name Harvard Medical School
Department Dept. Of Biological Chemistry & Molecular Pharmacology
Lab Struhl lab
Street address 240 Longwood Ave.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Samples (6) GSM142523, GSM142524, GSM142525, GSM142580, GSM142581, GSM142583
Series (1)
GSE6132 Whole genome mapping of p63 binding sites in ME180 human cervical carcinoma cells

Data table header descriptions
ID
SEQUENCE
Strand
Chromosome
Coordinate Genomic coordinate, NCBI Build 35
X_PM_probe
Y_PM_probe
X_MM_probe
Y_MM_probe

Data table
ID SEQUENCE Strand Chromosome Coordinate X_PM_probe Y_PM_probe X_MM_probe Y_MM_probe
2_194600977_1373_1959 TAAGAACAAGTTAAATTACAATGGC t chr2 194600977 1373 1959 1373 1960
2_194601020_1012_2505 CATCAAGAAAATAACTAAACAAGAA t chr2 194601020 1012 2505 1012 2506
2_194601062_344_1705 CATTGTACTCTGGTTTCTGAAAATT t chr2 194601062 344 1705 344 1706
2_194601089_139_2541 TAAGTATATTTTAAACATATTCCAA t chr2 194601089 139 2541 139 2542
2_194601125_1308_649 AATTCAACTGATTTGAGTATGATAG t chr2 194601125 1308 649 1308 650
2_194601155_315_1193 TACATTTTGCAAAGAAATTTAAGCA t chr2 194601155 315 1193 315 1194
2_194601199_1585_2307 CCTATAGTGGATTTAAAAAATGAGA t chr2 194601199 1585 2307 1585 2308
2_194601236_1672_657 CAATATGTGCTCTAATTATTAGTAG t chr2 194601236 1672 657 1672 658
2_194601268_124_923 TATATGCTAGAATTAAAACAGTCTC t chr2 194601268 124 923 124 924
2_194601302_490_1069 TCTACAGTCTAAGTGTTGTGTTGCC t chr2 194601302 490 1069 490 1070
2_194601349_665_1525 GCACAATAACTGTTTTTATTAACAT t chr2 194601349 665 1525 665 1526
2_194601384_346_229 TTGGTACTGACTGGTGCATCCTGGA t chr2 194601384 346 229 346 230
2_194601731_451_2265 TTTTCCAGAATAAAAAACGACTGCA t chr2 194601731 451 2265 451 2266
2_194601767_2318_1525 GGAAGGTAGTTTAACACATGTACAT t chr2 194601767 2318 1525 2318 1526
2_194601803_386_1781 TATTCAAGGGATCACTAAATTAATG t chr2 194601803 386 1781 386 1782
2_194601843_1615_1789 GACCATCCTAATGAAAAACAGGAAG t chr2 194601843 1615 1789 1615 1790
2_194601884_1253_491 GCTAAGTACTCATGGATCTCCTGTT t chr2 194601884 1253 491 1253 492
2_194601918_1243_2311 TCTACAAAATTTTTACAATAGTAGA t chr2 194601918 1243 2311 1243 2312
2_194601966_1503_2463 GACATAGAATATATTAAATTGAAAA t chr2 194601966 1503 2463 1503 2464
2_194602002_1038_339 TGTCCTGTGACTGGCGTAATGGGAT t chr2 194602002 1038 339 1038 340

Total number of rows: 2924606

Table truncated, full table size 232347 Kbytes.




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Supplementary data files not provided
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