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Status
Public on Aug 10, 2006
Title
Yeast_ALL DNA chip
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Saccharomyces cerevisiae Manufacturer
DNA microarray facility. Dept. Biochemistry, Universitat Autonoma de Barcelona
Manufacture protocol
Constructed in our laboratory by arraying 6014 different PCR-amplified ORF from S. cerevisiae on UltraGAPS slides (Corning) using a MicroGrid TM II (BioRobotics) machine. Details on the generation of the PRC fragments and chip construction are provided in Alberola et al. Int Microbiol. 2004 7(3):199-206
Support
glass
Coating
aminosilane
Description
-
Web link
http://quiro.uab.es/jarino/index_Ingles.htm Contributor(s)
Arino J , Barcelo A , Viladevall L , Casamayor A Citation(s)
15299026 Submission date
Aug 08, 2006
Last update date
May 03, 2013
Contact name
Antonio Casamayor
E-mail(s)
[email protected] Organization name
Universitat Autonoma de Barcelona
Lab
Biol. Mol. Llevat
Street address
Edifici IBB, Campus UAB
City
Cerdanyola
State/province
Barcelona
ZIP/Postal code
08193
Country
Spain
Samples (126)
GSM157024 , GSM157025 , GSM157026 , GSM157027 , GSM157028 , GSM157029
GSM157030 ,
GSM157031 ,
GSM157032 ,
GSM157033 ,
GSM194393 ,
GSM194695 ,
GSM194696 ,
GSM194697 ,
GSM289019 ,
GSM289029 ,
GSM290541 ,
GSM290542 ,
GSM290543 ,
GSM290544 ,
GSM306655 ,
GSM306864 ,
GSM306865 ,
GSM306866 ,
GSM306867 ,
GSM306868 ,
GSM306869 ,
GSM306870 ,
GSM386827 ,
GSM386828 ,
GSM386829 ,
GSM386830 ,
GSM407314 ,
GSM458965 ,
GSM458966 ,
GSM458967 ,
GSM458968 ,
GSM458969 ,
GSM458970 ,
GSM458996 ,
GSM458997 ,
GSM567137 ,
GSM567138 ,
GSM567139 ,
GSM567140 ,
GSM567141 ,
GSM567142 ,
GSM567143 ,
GSM567144 ,
GSM567145 ,
GSM567146 ,
GSM567147 ,
GSM567148 ,
GSM569905 ,
GSM569906 ,
GSM569907 ,
GSM569908 ,
GSM569909 ,
GSM569910 ,
GSM608860 ,
GSM608861 ,
GSM608862 ,
GSM608863 ,
GSM608864 ,
GSM608865 ,
GSM608866 ,
GSM608867 ,
GSM608868 ,
GSM608869 ,
GSM608870 ,
GSM608871 ,
GSM608872 ,
GSM608873 ,
GSM608874 ,
GSM608875 ,
GSM608876 ,
GSM608877 ,
GSM608878 ,
GSM608879 ,
GSM608880 ,
GSM608881 ,
GSM630553 ,
GSM630554 ,
GSM630555 ,
GSM630588 ,
GSM630655 ,
GSM630656 ,
GSM631186 ,
GSM631187 ,
GSM631188 ,
GSM631189 ,
GSM631190 ,
GSM631191 ,
GSM631192 ,
GSM631193 ,
GSM631194 ,
GSM631195 ,
GSM641527 ,
GSM641528 ,
GSM641529 ,
GSM641530 ,
GSM641531 ,
GSM641532 ,
GSM641533 ,
GSM641534 ,
GSM734658 ,
GSM734659 ,
GSM734660 ,
GSM734661 ,
GSM937247 ,
GSM937248 ,
GSM937251 ,
GSM937252 ,
GSM937312 ,
GSM937316 ,
GSM937319 ,
GSM937320 ,
GSM937443 ,
GSM937444 ,
GSM937471 ,
GSM937472 ,
GSM937476 ,
GSM937495 ,
GSM1423467 ,
GSM1423468 ,
GSM1423469 Series (21)
GSE6801 Transcriptional profiling of the protein phosphatase 2C family in yeast
GSE8111 Gcn2p regulates a G1/S cell cycle checkpoint in response to DNA damage
GSE11530 Transcriptional profiling of Rapamycin treatment in yeast cells lacking the Ptc1 protein phosphatase.
GSE11561 MPA and NQO studies (Sevilla)
GSE12192 Genome-wide expression profiling of the cryptolepine-induced toxicity in Saccharomyces cerevisiae
GSE15412 Yeast response to the DNA damaging beta-lapachone
GSE16215 Differential gene expression in high and low sulfide-producing yeast strains during wine fermentation
GSE18411 Lack of the pif1 helicase enhances zinc tolerance in S. cerevisiae
GSE22976 Transciptomic analysis of the hal4hal5 mutant of Saccharomyces cerevisiae
GSE23134 Role of the Glc7 phosphatase regulatory subunit Ypi1 in progression through mitosis
GSE24711 Transcriptomic profile of yeast cells lacking the high affinity K+-transport system
GSE24712 Transcriptomic changes induced in yeast cells by the lack of potassium in the medium
GSE25697 Severe alkaline pH stress induces a glucose starvation-related transcriptional response in S. cerevisiae
GSE26119 Plant Viral Movement Protein-expressing Yeast Transcriptome compared with wild-type Yeast Transcriptome
GSE26120 Plant Viral Movement Protein-expressing Yeast Transcriptome compared with Non-Functional Plant Viral Movement Protein-expressing Yeast Transcriptome
GSE29645 Yeast response to acid stress
GSE36251 Transcriptional effects of lack of Reg1
GSE38244 Transcriptional profiling of yeast cells lacking either the protein phosphatase Ptc6 or Ptc1 and Ptc6, members of the 2C family of protein phosphatases in Saccharomyces cerevisiae.
GSE38256 Transcriptional profiling of Rapamycin-treated ptc6 and ptc1ptc6 mutant yeast cells
GSE38260 Transcriptional profiling of ptc6 and ptc1ptc6 mutant yeast cells and the effects of Rapamycin
GSE58985 WT + DOX vs tetO:HAL3 vhs3 + DOX
Data table header descriptions ID GENE Open reading frame designator
Description Description of gene product
ORF
Data table ID GENE Description ORF YAL001C
TFC3
138 kDa|transcription factor tau (TFIIIC) subunit
YAL001C YAL002W
VPS8
membrane-associated hydrophilic protein which contains a C-terminal cysteine-rich region that conforms to the H2 variant of the RING finger Zn2+ binding motif
YAL002W YAL003W
EFB1
translation elongation factor EF-1beta
YAL003W YAL004W
Hypothetical ORF
YAL004W YAL005C
SSA1
heat shock protein of HSP70 family
YAL005C YAL007C
ERP2
p24 protein involved in membrane trafficking
YAL007C YAL008W
FUN14
Protein of unknown function
YAL008W YAL009W
SPO7
Integral nuclear/ER membrane protein of unknown function, required for normal nuclear envelope morphology and sporulation
YAL009W YAL010C
MDM10
mitochondrial outer membrane protein
YAL010C YAL011W
SWC3
Protein of unknown function, component of the Swr1p complex that incorporates Htz1p into chromatin; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae
YAL011W YAL012W
CYS3
cystathionine gamma-lyase
YAL012W YAL013W
DEP1
Transcriptional modulator involved in the regulation of structural genes involved in phospholipid biosynthesis, also participates in regulation of metabolically unrelated genes as well as maintenance of mating efficiency and sporulation
YAL013W YAL014C
SYN8
syntaxin family
YAL014C YAL015C
NTG1
DNA glycosylase
YAL015C YAL016W
TPD3
protein phosphatase 2A regulatory subunit A
YAL016W YAL017W
PSK1
contains serine/threonine protein kinase domain and shows homology with the SNF1 serine/threonine protein kinase
YAL017W YAL018C
Hypothetical ORF
YAL018C YAL019W
FUN30
Protein whose overexpression affects chromosome stability, potential Cdc28p substrate; homolog of Snf2p
YAL019W YAL020C
ATS1
Protein with a potential role in regulatory interactions between microtubules and the cell cycle, as suggested by genetic and physical interactions with Nap1p and genetic interactions with TUB1
YAL020C YAL021C
CCR4
carbon catabolite repression; transcriptional regulator for some glucose-repressed genes including ADH2
YAL021C
6223 440 Kbytes .Supplementary file Size Download File type/resource GPL4069_16pins_layout.txt.gz
78.9 Kb
(ftp) (http) TXT
GPL4069_4pins_layout.txt.gz
52.3 Kb
(ftp) (http) TXT
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