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Platform GPL1996 Query DataSets for GPL1996
Status Public on May 03, 2005
Title Maize cDNA Generation II Version B
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Zea mays
 
Description The ISU microarray facility have generated a maize gene chip that contains 12,160 spotted cDNA inserts. These cDNA clones were obtained from NSF Plant Genome EST projects led by Ginny Walbot and Pat Schnable.
 
Contributor(s) Schnable PS
Submission date Apr 25, 2005
Last update date May 27, 2005
Contact name Patrick S. Schnable
E-mail(s) [email protected]
Phone 515-294-0975
Organization name Iowa State University
Street address 2035B Roy J Carver Co-Lab
City Ames
State/province IA
ZIP/Postal code 50011
Country USA
 
Samples (200) GSM52141, GSM52142, GSM52143, GSM52144, GSM52145, GSM52146 
Series (2)
GSE2702 Big bluestem/RAMP experiment
GSE10539 Maize primary roots: inbred lines vs. hybrids

Data table header descriptions
ID
meta_row The number of rows of subgrids
meta_column The number of columns of subgrids
row The number of rows of spots contained within the grid
column The number of columns of spots contained within the grid
ref Plate source refer information of each spot
GB_ACC GenBank Accession Number
SPOT_ID Code for spots without CLONE_ID, e.g., empty, unknown, etc.
CLONE_ID Clone ID in GenBank

Data table
ID meta_row meta_column row column ref GB_ACC SPOT_ID CLONE_ID
1 1 4 1 20 stan2124h-a-4-614011B05.y1 AW011633 614011B05.y1
2 1 4 2 20 stan2027h-a-20-614024H02.y1 AW042225 614024H02.y1
3 1 4 3 20 stan3235h-a-12-614064F03.x1 AW017871 614064F03.x1
4 1 4 4 20 stan4043h-a-4-614097H05.y1 AW155693 614097H05.y1
5 1 4 5 20 stan4458h-a-20-707020A04.y1 AW424598 707020A04.y1
6 1 4 6 20 stan6981h-a-12-945030C01.Y1 BE056196 945030C01.Y1
7 1 4 7 20 stan8689h-a-4-606027G03.x1 AI715074 606027G03.x1
8 1 4 8 20 stan9093h-a-20-606045G01.x1 AI738115 606045G01.x1
9 1 4 9 20 stan104127h-a-12-603010F06.x1 AI855230 603010F06.x1
10 1 4 10 20 stan132135h-a-4-486023D03.x1 AI491473 486023D03.x1
11 1 4 11 20 stan136139h-a-20-486053H11.x3 AI586677 486053H11.x3
12 1 4 12 20 stan144168h-a-12-486018H04.x4 AI461535 486018H04.x4
13 1 4 13 20 stan202205h-a-4-618026A01.x1 AI939877 618026A01.x1
14 1 4 14 20 stan220231h-a-20-683019B02.x1 AW067220 683019B02.x1
15 1 4 15 20 1518Wholeh-a-12-MEST12-B11 BG840815 MEST12-B11
16 1 4 16 20 2326wholeh-a-4-MEST10-G01 BG840695 MEST10-G01
17 1 4 17 20 0104-re-array-a-20-MEST123-B06 BM078696 MEST123-B06
18 1 4 18 20 0912-re-array-a-12-MEST335-H05 BM341506 MEST335-H05
19 1 4 19 20 1720-re-array-a-4-MEST500-B02 BM379132 MEST500-B02
20 1 4 1 19 stan2124h-i-4-614011D06.y1 AW011655 614011D06.y1

Total number of rows: 12160

Table truncated, full table size 771 Kbytes.






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