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Status
Public on Feb 20, 2015
Title
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array [Custom CDF: Lepidium_LsRNA_FDRp01_ANOVA_Probes_Keep_3probe]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Arabidopsis thaliana Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's web site
Description
Based on the v14.0.0 Arabidopsis CustomCDF from http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF but processed with a novel cross-species masking technique involving taking an ANOVA for each probe to determine whether it is registering signal or noise
Submission date
Mar 07, 2014
Last update date
Feb 20, 2015
Contact name
Simon Peter Pearce
E-mail(s)
[email protected] Organization name
University of Nottingham
Department
Plant and Crop Sciences
Street address
Sutton Bonington Campus
City
Sutton Bonington
State/province
Leicestershire
ZIP/Postal code
LE12 5RD
Country
United Kingdom
Samples (107)
GSM1341976 , GSM1341977 , GSM1341978 , GSM1341979 , GSM1341980 , GSM1341981
GSM1341982 ,
GSM1341983 ,
GSM1341984 ,
GSM1341985 ,
GSM1341986 ,
GSM1341987 ,
GSM1341988 ,
GSM1341989 ,
GSM1341990 ,
GSM1341991 ,
GSM1341992 ,
GSM1341993 ,
GSM1341994 ,
GSM1341995 ,
GSM1341996 ,
GSM1341997 ,
GSM1341998 ,
GSM1341999 ,
GSM1342000 ,
GSM1342001 ,
GSM1342002 ,
GSM1342003 ,
GSM1342004 ,
GSM1342005 ,
GSM1342006 ,
GSM1342007 ,
GSM1342008 ,
GSM1342009 ,
GSM1342010 ,
GSM1342011 ,
GSM1342012 ,
GSM1342013 ,
GSM1342014 ,
GSM1342015 ,
GSM1342016 ,
GSM1342017 ,
GSM1342018 ,
GSM1342019 ,
GSM1342020 ,
GSM1342021 ,
GSM1342022 ,
GSM1342023 ,
GSM1342024 ,
GSM1342025 ,
GSM1342026 ,
GSM1342027 ,
GSM1342028 ,
GSM1342029 ,
GSM1342030 ,
GSM1342031 ,
GSM1342032 ,
GSM1342033 ,
GSM1342034 ,
GSM1342035 ,
GSM1342036 ,
GSM1342037 ,
GSM1342038 ,
GSM1342039 ,
GSM1342040 ,
GSM1342041 ,
GSM1342042 ,
GSM1342043 ,
GSM1342044 ,
GSM1342045 ,
GSM1342046 ,
GSM1342047 ,
GSM1342048 ,
GSM1342049 ,
GSM1342050 ,
GSM1342051 ,
GSM1342052 ,
GSM1342053 ,
GSM1342054 ,
GSM1342055 ,
GSM1342056 ,
GSM1342057 ,
GSM1342058 ,
GSM1342059 ,
GSM1342060 ,
GSM1342061 ,
GSM1342062 ,
GSM1342063 ,
GSM1342064 ,
GSM1342065 ,
GSM1342066 ,
GSM1342067 ,
GSM1342068 ,
GSM1342069 ,
GSM1342070 ,
GSM1342071 ,
GSM1342072 ,
GSM1342073 ,
GSM1342074 ,
GSM1342075 ,
GSM1342076 ,
GSM1342077 ,
GSM1342078 ,
GSM1342079 ,
GSM1342080 ,
GSM1342081 ,
GSM1342082 Series (1)
GSE55702 Lepidium sativum seed germination timecourse
Relations Affiliated with
GPL198
Data table header descriptions ID Probe set name
ORF Locus tag
SPOT_ID
Data table ID ORF SPOT_ID AT1G01030_at
AT1G01030
AT1G01050_at
AT1G01050
AT1G01080_at
AT1G01080
AT1G01090_at
AT1G01090
AT1G01100_at
AT1G01100
AT1G01110_at
AT1G01110
AT1G01120_at
AT1G01120
AT1G01140_at
AT1G01140
AT1G01160_at
AT1G01160
AT1G01170_at
AT1G01170
AT1G01190_at
AT1G01190
AT1G01200_at
AT1G01200
AT1G01225_at
AT1G01225
AT1G01230_at
AT1G01230
AT1G01240_at
AT1G01240
AT1G01250_at
AT1G01250
AT1G01260_at
AT1G01260
AT1G01280_at
AT1G01280
AT1G01290_at
AT1G01290
AT1G01300_at
AT1G01300
13895 325 Kbytes .Supplementary file Size Download File type/resource GPL18395_Lepidium_LsRNA_FDRp01_ANOVA_Probes_Keep_3probe.CDF.gz
1.9 Mb
(ftp) (http) CDF
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