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Status
Public on Apr 18, 2013
Title
Affymetrix S. cerevisiae TAG4 101K array [GenFlex_Tag_16K_v2]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Saccharomyces cerevisiae Manufacturer
Affymetrix
Manufacture protocol
In situ synthesis (Affymetrix)
Description
Preprocessed data format after extraction from raw data file for Affymetrix TAG4 S. cerevisiae array. Original array platform design can be found as raw data file and in submission GPL8633.
Submission date
Apr 17, 2013
Last update date
Apr 18, 2013
Contact name
Ramon Gonzalez
E-mail(s)
[email protected] Phone
+34 941299684
Organization name
Consejo Superior de Investigaciones Científicas
Department
Instituto de Ciencias de la Vid y del Vino
Lab
Enología
Street address
C. Madre de Dios, 51
City
Logroño
ZIP/Postal code
E-26006
Country
Spain
Samples (294)
GSM1124981 , GSM1124982 , GSM1124983 , GSM1124984 , GSM1124985 , GSM1124986
GSM1124987 ,
GSM1124988 ,
GSM1124989 ,
GSM1124990 ,
GSM1124991 ,
GSM1124992 ,
GSM1124993 ,
GSM1124994 ,
GSM1124995 ,
GSM1124996 ,
GSM1124997 ,
GSM1124998 ,
GSM1124999 ,
GSM1125000 ,
GSM1125001 ,
GSM1125002 ,
GSM1125003 ,
GSM1125004 ,
GSM1125005 ,
GSM1125006 ,
GSM1125007 ,
GSM1125008 ,
GSM1146037 ,
GSM1146038 ,
GSM1146039 ,
GSM1146040 ,
GSM1146041 ,
GSM1146042 ,
GSM1146043 ,
GSM1146044 ,
GSM1146045 ,
GSM1146046 ,
GSM1146047 ,
GSM1146048 ,
GSM1146049 ,
GSM1146050 ,
GSM1146051 ,
GSM1146052 ,
GSM1146053 ,
GSM1146054 ,
GSM1146055 ,
GSM1146056 ,
GSM1146057 ,
GSM1146058 ,
GSM1146059 ,
GSM1146060 ,
GSM1146061 ,
GSM1146062 ,
GSM1146063 ,
GSM1146064 ,
GSM1146065 ,
GSM1146066 ,
GSM2388145 ,
GSM2388146 ,
GSM2388147 ,
GSM2388148 ,
GSM2388149 ,
GSM2388150 ,
GSM2388151 ,
GSM2388152 ,
GSM2388153 ,
GSM2388154 ,
GSM2388155 ,
GSM2388156 ,
GSM2388157 ,
GSM2388158 ,
GSM2388159 ,
GSM2388160 ,
GSM2388161 ,
GSM2388162 ,
GSM2388163 ,
GSM2388164 ,
GSM2388165 ,
GSM2388166 ,
GSM2388167 ,
GSM2388168 ,
GSM2388169 ,
GSM2388170 ,
GSM2388171 ,
GSM2388172 ,
GSM2388173 ,
GSM2388174 ,
GSM2388175 ,
GSM2388176 ,
GSM2388177 ,
GSM2388178 ,
GSM2388179 ,
GSM2388180 ,
GSM2388181 ,
GSM2388182 ,
GSM2388183 ,
GSM2388184 ,
GSM2388185 ,
GSM2388186 ,
GSM2388187 ,
GSM2388188 ,
GSM2388189 ,
GSM2388190 ,
GSM2388191 ,
GSM2388192 ,
GSM2388193 ,
GSM2388194 ,
GSM2388195 ,
GSM2388196 ,
GSM2388197 ,
GSM2388198 ,
GSM2388199 ,
GSM2388200 ,
GSM2388201 ,
GSM2388202 ,
GSM2388203 ,
GSM2388204 ,
GSM2388205 ,
GSM2388206 ,
GSM2388207 ,
GSM2388208 ,
GSM2388209 ,
GSM2388210 ,
GSM2388211 ,
GSM2388212 ,
GSM2388213 ,
GSM2388214 ,
GSM2388215 ,
GSM2388216 ,
GSM2388217 ,
GSM2388218 ,
GSM2388219 ,
GSM2388220 ,
GSM2388221 ,
GSM2388222 ,
GSM2388223 ,
GSM2388224 ,
GSM2388225 ,
GSM2388226 ,
GSM2388227 ,
GSM2388228 ,
GSM2388229 ,
GSM2388230 ,
GSM2388231 ,
GSM2388232 ,
GSM2388233 ,
GSM2388234 ,
GSM2388235 ,
GSM2388236 ,
GSM2388237 ,
GSM2388238 ,
GSM2388239 ,
GSM2388240 ,
GSM2388241 ,
GSM2388242 ,
GSM2388243 ,
GSM2388244 ,
GSM2388245 ,
GSM2388246 ,
GSM2388247 ,
GSM2388248 ,
GSM2388249 ,
GSM2388250 ,
GSM2388251 ,
GSM2388252 ,
GSM2388253 ,
GSM2388254 ,
GSM2388255 ,
GSM2388256 ,
GSM2388257 ,
GSM2388258 ,
GSM2388259 ,
GSM2388260 ,
GSM2388261 ,
GSM2388262 ,
GSM2388263 ,
GSM2388264 ,
GSM2388265 ,
GSM2388266 ,
GSM2388267 ,
GSM2388268 ,
GSM2388269 ,
GSM2388270 ,
GSM2388271 ,
GSM2388272 ,
GSM2388273 ,
GSM2388274 ,
GSM2388275 ,
GSM2388276 ,
GSM2388277 ,
GSM2388278 ,
GSM2388279 ,
GSM2388280 ,
GSM2388281 ,
GSM2388282 ,
GSM2388283 ,
GSM2388284 ,
GSM2388285 ,
GSM2388286 ,
GSM2388287 ,
GSM2388288 ,
GSM2388289 ,
GSM2388290 ,
GSM2388291 ,
GSM2388292 ,
GSM2388293 ,
GSM2388294 ,
GSM2388295 ,
GSM2388296 ,
GSM2388297 ,
GSM2388298 ,
GSM2388299 ,
GSM2388300 ,
GSM2388301 ,
GSM2388302 ,
GSM2388303 ,
GSM2388304 ,
GSM2388305 ,
GSM2388306 ,
GSM2388307 ,
GSM2388308 ,
GSM2388309 ,
GSM2388310 ,
GSM2388311 ,
GSM2388312 ,
GSM2388313 ,
GSM2388314 ,
GSM2388315 ,
GSM2388316 ,
GSM2388317 ,
GSM2388318 ,
GSM2388319 ,
GSM2388320 ,
GSM2388321 ,
GSM2388322 ,
GSM2388323 ,
GSM2388324 ,
GSM2388325 ,
GSM2388326 ,
GSM2388327 ,
GSM2388328 ,
GSM2388329 ,
GSM2388330 ,
GSM2388331 ,
GSM2388332 ,
GSM2388333 ,
GSM2388334 ,
GSM2388335 ,
GSM2388336 ,
GSM2388337 ,
GSM2388338 ,
GSM2388339 ,
GSM2388340 ,
GSM2388341 ,
GSM2388342 ,
GSM2388343 ,
GSM2388344 ,
GSM2388345 ,
GSM2388346 ,
GSM2388347 ,
GSM2388348 ,
GSM2388349 ,
GSM2388350 ,
GSM2388351 ,
GSM2388352 ,
GSM2388353 ,
GSM2388354 ,
GSM2388355 ,
GSM2388356 ,
GSM2388357 ,
GSM2388358 ,
GSM2388359 ,
GSM2388360 ,
GSM2388361 ,
GSM2388362 ,
GSM2388363 ,
GSM2388364 ,
GSM2388365 ,
GSM2388366 ,
GSM2388367 ,
GSM2388368 ,
GSM2388369 ,
GSM2388370 ,
GSM2388371 ,
GSM2388372 ,
GSM2388373 ,
GSM2388374 ,
GSM2388375 ,
GSM2388376 ,
GSM2388377 ,
GSM2388378 ,
GSM2388379 ,
GSM2388380 Series (3)
GSE46145 Genome-wide study of the adaptation of Saccharomyces cerevisiae to the proliferative stages of wine fermentation
GSE47175 A functional screen for copper homeostasis genes identifies a pharmacologically tractable cellular system
GSE89761 Genotype specific phenotypic behaviour of auxotrophic and prototrophic gene deletion collections
Relations Alternative to
GPL8633
Data table header descriptions ID STRAIN ORF ORF Name
gene essential_gene feature_type GO_process GO_function GO_component
Data table ID STRAIN ORF gene essential_gene feature_type GO_process GO_function GO_component YAL001C::chr1_1:uptag
YAL001C::chr1_1
YAL001C TFC3
yes
ORF::Verified
transcription initiation from RNA polymerase III promoter
RNA polymerase III transcription factor activity
mitochondrion*
YAL002W::chr1_1:uptag
YAL002W::chr1_1
YAL002W VPS8
no
ORF::Verified
late endosome to vacuole transport
molecular function unknown
membrane fraction
YAL003W::chr1_1:uptag
YAL003W::chr1_1
YAL003W EFB1
yes
ORF::Verified
translational elongation
translation elongation factor activity
ribosome*
YAL004W::chr1_1:uptag
YAL004W::chr1_1
YAL004W YAL004W
no
ORF::Dubious
YAL005C::chr1_1:uptag
YAL005C::chr1_1
YAL005C SSA1
no
ORF::Verified
translation*
ATPase activity*
cytoplasm*
YAL007C::chr1_1:uptag
YAL007C::chr1_1
YAL007C ERP2
no
ORF::Verified
ER to Golgi vesicle-mediated transport
molecular function unknown
ER to Golgi transport vesicle
YAL008W::chr1_1:uptag
YAL008W::chr1_1
YAL008W FUN14
no
ORF::Verified
biological process unknown
molecular function unknown
mitochondrion*
YAL009W::chr1_1:uptag
YAL009W::chr1_1
YAL009W SPO7
no
ORF::Verified
sporulation (sensu Fungi)*
molecular function unknown
integral to membrane*
YAL010C::chr1_1:uptag
YAL010C::chr1_1
YAL010C MDM10
no
ORF::Verified
telomere maintenance*
molecular function unknown
mitochondrial outer membrane*
YAL011W::chr1_1:uptag
YAL011W::chr1_1
YAL011W SWC3
no
ORF::Verified
response to drug*
molecular function unknown
nucleus*
YAL012W::chr00_12:downtag
YAL012W::chr00_12
YAL012W CYS3
no
ORF::Verified
response to drug*
cystathionine gamma-lyase activity
cytoplasm
YAL012W::chr00_12:uptag
YAL012W::chr00_12
YAL012W CYS3
no
ORF::Verified
response to drug*
cystathionine gamma-lyase activity
cytoplasm
YAL013W::chr1_1:uptag
YAL013W::chr1_1
YAL013W DEP1
no
ORF::Verified
telomere maintenance*
histone deacetylase activity*
nucleus*
YAL014C::chr1_1:uptag
YAL014C::chr1_1
YAL014C SYN8
no
ORF::Verified
transport
SNAP receptor activity
endosome
YAL015C::chr1_1:uptag
YAL015C::chr1_1
YAL015C NTG1
no
ORF::Verified
DNA repair*
DNA-(apurinic or apyrimidinic site) lyase activity*
nucleus*
YAL016C-B::chr00_20:downtag
YAL016C-B::chr00_20
YAL016C-B YAL016C-B
no
ORF::Dubious
YAL016C-B::chr00_20:uptag
YAL016C-B::chr00_20
YAL016C-B YAL016C-B
no
ORF::Dubious
YAL016W::chr00_12:downtag
YAL016W::chr00_12
YAL016W TPD3
no
ORF::Verified
translation*
protein phosphatase type 2A activity
cytoplasm*
YAL016W::chr00_12:uptag
YAL016W::chr00_12
YAL016W TPD3
no
ORF::Verified
translation*
protein phosphatase type 2A activity
cytoplasm*
YAL017W::chr1_1:uptag
YAL017W::chr1_1
YAL017W PSK1
no
ORF::Verified
protein amino acid phosphorylation*
protein serine/threonine kinase activity
cytoplasm
12669 1792 Kbytes .Supplementary file Size Download File type/resource GPL17030_GenFlex_Tag_16K_v2.cdf.gz
3.3 Mb
(ftp) (http) CDF
GPL17030_straininfo.tab.txt.gz
114.0 Kb
(ftp) (http) TXT
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