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Status
Public on Jun 30, 2004
Title
Agilent Mouse Development Oligo Microarray (G4120A) Reannotated 020504
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus
Description
Description Mouse Development Oligo Microarry, Catalog Number G4120A. Reannotated on 020504 at Stanford University School of Medicine, Cardiovascular Division, using current NCBI databases. 20,371 60-mer oligonucleotides representing over 20,000 known mouse genes. Derived from the National Institutes of Aging/NIH cDNA mouse clone set that includes genes from sequences of stem cells and very early-stage embryo cDNA libraries.
Contributor(s)
Spin JM , Quertermous T Submission date
Jun 23, 2004
Last update date
Jan 17, 2013
Contact name
Joshua M. Spin
E-mail(s)
[email protected] Phone
650-498-6353
Organization name
Stanford University
Department
Internal Medicine/Cardiovascular Division
Lab
Philip S. Tsao Lab
Street address
300 Pasteur Drive
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Samples (30)
GSM25978 , GSM25979 , GSM26006 , GSM26007 , GSM26008 , GSM26009
GSM26010 ,
GSM26011 ,
GSM26012 ,
GSM26013 ,
GSM26014 ,
GSM26015 ,
GSM26016 ,
GSM26017 ,
GSM26018 ,
GSM26019 ,
GSM26020 ,
GSM26021 ,
GSM26022 ,
GSM26023 ,
GSM26024 ,
GSM26025 ,
GSM26026 ,
GSM77334 ,
GSM77335 ,
GSM77336 ,
GSM77337 ,
GSM77338 ,
GSM77339 ,
GSM77340 Series (2)
GSE1506 A404 Smooth Muscle Cell Differentiation
GSE3432 Murine ES Cells: Control vs. Triple-Fusion Transfected
Data table header descriptions ID ROW Row
COL Column
CLONE_ID PROBE_UID Probe Name
CONTROL_TYPE Control Type
PROBE_NAME Probe Unique Identifier
NAME Name
DESCRIPTION Description
GB_ACC GenBank accession number ;
UNIGENE Unigene Cluster Number ;
GENE Entrez GENE ID
SPOT_ID Column added by GEO staff to facilitate sequence tracking in Entrez GEO
Data table ID ROW COL CLONE_ID PROBE_UID CONTROL_TYPE PROBE_NAME NAME DESCRIPTION GB_ACC UNIGENE GENE SPOT_ID 1
1
1
0
pos
(+)Pro25G-03
Pro25G
(+)Pro25G-03
2
1
2
1
neg
(-)3xSLv1
NegativeControl
(-)3xSLv1
3
1
3
L0267E07-3
2
FALSE
A_65_P00704
L0267E07-3
proteasome (prosome, macropain) subunit, alpha type 5
AW556383 2287
Psma5 4
1
4
U54984.1
3
FALSE
A_65_P00799
U54984.1
matrix metalloproteinase 14 (membrane-inserted)
U54984 19945
Mmp14 5
1
5
H3149F09-5
4
FALSE
A_65_P00894
H3149F09-5
cadherin 11
NM_009866 1571
Cdh11 6
1
6
C0152H05-3
5
FALSE
A_65_P00986
C0152H05-3
RIKEN cDNA 2210417O06 gene
AW542124 25353
2210417O06Rik 7
1
7
6
pos
(+)Pro25G-02
Pro25G
(+)Pro25G-02
8
1
8
L0951F09-3
7
FALSE
A_65_P01182
L0951F09-3
ESTs BG061827
BG061827 221899
BG061827 9
1
9
H3065B10-3
8
FALSE
A_65_P01272
H3065B10-3
Mus musculus transcribed sequence with weak similarity to protein ref:NP_081764.1 (M.musculus) RIKEN cDNA 5730493B19 [Mus musculus]
BG068410 173571
10
1
10
C0267B04-3
9
FALSE
A_65_P01370
C0267B04-3
C0267B04-5N NIA Mouse 7.5-dpc Whole Embryo cDNA Library (Long) Mus musculus cDNA clone NIA:C0267B04 IMAGE:30017007 5', MRNA sequence
CA538475 11
1
11
H3103D06-3
10
FALSE
A_65_P01468
H3103D06-3
ESTs BG071806
BG071806 251266
BG071806 12
1
12
H3158G12-3
11
FALSE
A_65_P01567
H3158G12-3
metallothionein-like 5, testis-specific (tesmin)
BG076362 56287
Mtl5 13
1
13
J1002D05-3
12
FALSE
A_65_P01662
J1002D05-3
AU041452 Mouse four-cell-embryo cDNA Mus musculus cDNA clone J1002D05 3', MRNA sequence
AU041452 14
1
14
6
pos
(+)Pro25G-02
Pro25G
(+)Pro25G-02
15
1
15
L0253B01-3
13
FALSE
A_65_P01852
L0253B01-3
Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732469E12 product:unclassifiable, full insert sequence.
AW555335 207090
16
1
16
C0162E08-3
14
FALSE
A_65_P01947
C0162E08-3
transcribed sequence with strong similarity to protein pir:S12207 (M.musculus) S12207 hypothetical protein (B2 element) - mouse
AW542843 222562
17
1
17
K0515H11-3
15
FALSE
A_65_P02041
K0515H11-3
ESTs BM238332
BM238332 217306
BM238332 18
1
18
K0310D04-3
16
FALSE
A_65_P02126
K0310D04-3
huntingtin interacting protein 1
BM231474 50610
Hip1 19
1
19
H3046H03-3
17
FALSE
A_65_P02223
H3046H03-3
RIKEN cDNA E130014J05 gene
BG066780 133186
E130014J05Rik 20
1
20
J0068H05-3
18
FALSE
A_65_P02319
J0068H05-3
ESTs C79601
C79601 172782
C79601
21446 2505 Kbytes .Supplementary data files not provided
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