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Have you explored our new Comparative Genome Viewer (CGV) yet?

URL for current configuration
This URL is a temporary URL and is valid approximately for 90 days.

Arabidopsis thaliana

(thale cress)
Assembly:

Assembly: TAIR10.1

(GCF_000001735.4)
Search assembly
Examples

    Assemblies

    Assembly
    Select an assembly to change view

    Locations for Gene AT1G17080

    No regions for assembly
    • SequenceLocation
    • NC_003070.95,840,269 - 5,841,745

    Ideogram View

    Tracks and User Data

    Name Location

    Supported File/Data types

    • Uploaded tracks
      • BED
      • GFF3
      • GTF
      • GVF
      • VCF
      • HGVS
      • WIG
      • ASN.1 (text and binary)
    • Remote tracks
      • Remote BAM.bai or CSI index file present at same location
      • Remote VCFun-indexed up to 2000 lines or with an index file present at the same location
      • BigBed
      • BigWig

    BLAST

    Details
    Alignments
    Only alignments on the current assembly are shown

    Tracks by Accession

    Assembly Region Details

    Features of Interest
    Other sequence representations
    for assembly region(s) in view- none -- loading …
    Sequence IDType
    Back to region
    Checking for GRC genome issues ...Add Track
    Not applicable for this organism/assembly

    History

    Select gene from history
     Collapse sidebar [NC_003070.9:5,840,120 - 5,841,892
    Region Gene
    No exons
    Exon Navigator

    BLAST Alignment Inspector

    Waiting for track hubs …
    `