U.S. flag

An official website of the United States government

    • Showing Current items.

    LINC01758 long intergenic non-protein coding RNA 1758 [ Homo sapiens (human) ]

    Gene ID: 105378788, updated on 10-Dec-2024

    Summary

    Official Symbol
    LINC01758provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1758provided by HGNC
    Primary source
    HGNC:HGNC:52547
    See related
    Ensembl:ENSG00000229639 AllianceGenome:HGNC:52547
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LINC01758 in Genome Data Viewer
    Location:
    1p31.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (69433255..69435409)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (69310512..69312666)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (69898938..69901092)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:69520590-69521789 Neighboring gene long intergenic non-protein coding RNA 1707 Neighboring gene uncharacterized LOC105378787 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:69709807-69710471 Neighboring gene long intergenic non-protein coding RNA 2791 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:69777582-69778086 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:69778087-69778590 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:69875655-69876154 Neighboring gene uncharacterized LOC105378789 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 987 Neighboring gene leucine rich repeat containing 7 Neighboring gene shugoshin 1 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_147164.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL157406
      Related
      ENST00000448001.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      69433255..69435409
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      69310512..69312666
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    External link. Please review our privacy policy.