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    LOC105372623 uncharacterized LOC105372623 [ Homo sapiens (human) ]

    Gene ID: 105372623, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105372623
    Gene description
    uncharacterized LOC105372623
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105372623 in Genome Data Viewer
    Location:
    20q12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (42949390..42955794)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (44681517..44687921)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type T Neighboring gene uncharacterized LOC101927159 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr20:41379572-41380771 Neighboring gene uncharacterized LOC124904981 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr20:41614665-41615864 Neighboring gene PTPRT antisense RNA 1 Neighboring gene RN7SK pseudogene 100

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      42949390..42955794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_936733.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      44681517..44687921
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007089625.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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