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    LOC105370798 uncharacterized LOC105370798 [ Homo sapiens (human) ]

    Gene ID: 105370798, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105370798
    Gene description
    uncharacterized LOC105370798
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105370798 in Genome Data Viewer
    Location:
    15q21.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (44854557..44856774)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (42662567..42664784)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:45021095-45022080 Neighboring gene ring finger protein 4B, pseudogene Neighboring gene tripartite motif containing 69 Neighboring gene Sharpr-MPRA regulatory region 4328 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:45084988-45085176 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:45098626-45098830 Neighboring gene Sharpr-MPRA regulatory region 4183 Neighboring gene sorbitol dehydrogenase 2, pseudogene Neighboring gene RNA, U1 small nuclear 119, pseudogene Neighboring gene telomere repeat binding bouquet formation protein 2 pseudogene Neighboring gene 5-azacytidine induced 2 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      44854557..44856774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_932185.3 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187605.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      178889..181107
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_951894.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      42662567..42664784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007085923.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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