NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_030381.1 RefSeqGene
- Range
-
5103..40404
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001082537.3 → NP_001076006.1 tectonic-1 isoform 2 precursor
See identical proteins and their annotated locations for NP_001076006.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform 2).
- Source sequence(s)
-
AC144522, AK295514, BC062611, CA419765
- Consensus CDS
-
CCDS41835.1
- UniProtKB/Swiss-Prot
- A8MX11, Q2MV58, Q49A60, Q6P5X1, Q6UXW2, Q8NAE9, Q96N72, Q9H798
- UniProtKB/TrEMBL
-
A0A0A0MRU7
- Related
- ENSP00000448735.1, ENST00000551590.5
- Conserved Domains (1) summary
-
- pfam07773
Location:78 → 387
- DUF1619; Protein of unknown function (DUF1619)
-
NM_001082538.3 → NP_001076007.1 tectonic-1 isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC144522, AK295514, AY358184, CA419765
- Consensus CDS
-
CCDS41834.1
- UniProtKB/TrEMBL
-
A0A0A0MRU7
- Related
- ENSP00000380779.4, ENST00000397659.9
- Conserved Domains (1) summary
-
- pfam07773
Location:78 → 387
- DUF1619; Protein of unknown function (DUF1619)
-
NM_001173975.3 → NP_001167446.1 tectonic-1 isoform 4
See identical proteins and their annotated locations for NP_001167446.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate splice site in the 5' region, initiates translation at an alternate start codon, and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The resulting isoform (4) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC144522, AK092775, AK295514, CA419765
- UniProtKB/TrEMBL
-
A0A0A0MRU7
- Conserved Domains (1) summary
-
- pfam07773
Location:22 → 331
- DUF1619; Protein of unknown function (DUF1619)
-
NM_001173976.2 → NP_001167447.1 tectonic-1 isoform 5 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) includes an alternate exon in the 5' region, initiates translation at an alternate start codon, and lacks an in-frame exon and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The resulting isoform (5) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC144522, AK024780, AK055891, CA419765
- UniProtKB/TrEMBL
-
A0A0A0MRU7
- Conserved Domains (1) summary
-
- pfam07773
Location:18 → 327
- DUF1619; Protein of unknown function (DUF1619)
-
NM_001319680.2 → NP_001306609.1 tectonic-1 isoform 6 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks an in-frame exon and uses two alternate in-frame splice sites in the 3' coding region compared to variant 1. The resulting isoform (6) is shorter than isoform 1.
- Source sequence(s)
-
AC002350, AC144522
- Consensus CDS
-
CCDS91749.1
- UniProtKB/TrEMBL
- A0A087X1J4, A0A0A0MRU7
- Related
- ENSP00000484255.2, ENST00000614115.5
- Conserved Domains (1) summary
-
- pfam07773
Location:78 → 387
- DUF1619; Protein of unknown function (DUF1619)
-
NM_001319681.2 → NP_001306610.1 tectonic-1 isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) contains an alternate exon in the 5' region, initiates translation at a downstream start codon, and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The resulting isoform (7) has a shorter N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC144522, AK295514, AK301732, CA419765
- UniProtKB/TrEMBL
- A8MW34, B7Z7A7
- Conserved Domains (1) summary
-
- pfam07773
Location:1 → 209
- DUF1619; Protein of unknown function (DUF1619)
-
NM_001319682.3 → NP_001306611.1 tectonic-1 isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) uses an alternate splice site in the 5' region, initiates translation at an alternate start codon, lacks multiple 3' coding exons, and contains an alternate 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (8) has distinct N- and C-termini and is shorter than isoform 1.
- Source sequence(s)
-
AC144522, AK295514, BC033811
- UniProtKB/TrEMBL
-
Q05BR9
- Conserved Domains (1) summary
-
- pfam07773
Location:22 → 153
- DUF1619; Protein of unknown function (DUF1619)
-
NM_024549.6 → NP_078825.2 tectonic-1 isoform 3 precursor
See identical proteins and their annotated locations for NP_078825.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an exon and contains an alternate in-frame exon in the central coding region and an alternate in-frame splice site in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform 3).
- Source sequence(s)
-
AC144522, AK295514, BC040113, CA419765
- Consensus CDS
-
CCDS41833.1
- UniProtKB/TrEMBL
-
A0A0A0MRU7
- Related
- ENSP00000380775.3, ENST00000397655.7
- Conserved Domains (1) summary
-
- pfam07773
Location:78 → 373
- DUF1619; Protein of unknown function (DUF1619)
RNA
-
NR_135088.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) uses an alternate splice site in the 5' terminal exon, contains an alternate exon in the 5' region, and lacks two exons and uses an alternate splice site in the 3' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC144522, AK295514, BC044885, CA419765
- Related
-
ENST00000464809.5