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    SYNJ1 synaptojanin 1 [ Homo sapiens (human) ]

    Gene ID: 8867, updated on 10-Dec-2024

    Summary

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    Official Symbol
    SYNJ1provided by HGNC
    Official Full Name
    synaptojanin 1provided by HGNC
    Primary source
    HGNC:HGNC:11503
    See related
    Ensembl:ENSG00000159082 MIM:604297; AllianceGenome:HGNC:11503
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    DEE53; EIEE53; INPP5G; PARK20
    Summary
    This gene encodes a phosphoinositide phosphatase that regulates levels of membrane phosphatidylinositol-4,5-bisphosphate. As such, expression of this enzyme may affect synaptic transmission and membrane trafficking. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2011]
    Expression
    Broad expression in brain (RPKM 21.4), bone marrow (RPKM 6.6) and 22 other tissues See more
    Orthologs
    mouse all
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    Genomic context

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    See SYNJ1 in Genome Data Viewer
    Location:
    21q22.11
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (32628759..32728394, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (30994760..31094413, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (34001073..34100705, complement)

    Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene CFAP298-TCP10L readthrough Neighboring gene Sharpr-MPRA regulatory region 410 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18364 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18365 Neighboring gene cilia and flagella associated protein 298 Neighboring gene olfactory receptor family 7 subfamily E member 23 pseudogene Neighboring gene uncharacterized LOC124905011 Neighboring gene ReSE screen-validated silencer GRCh37_chr21:34033532-34033721 Neighboring gene H3K27ac hESC enhancer GRCh37_chr21:34099530-34100030 Neighboring gene H3K27ac hESC enhancer GRCh37_chr21:34100031-34100531 Neighboring gene PAXBP1 antisense RNA 1 Neighboring gene uncharacterized LOC124905010 Neighboring gene PAX3 and PAX7 binding protein 1 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:34143733-34144722 Neighboring gene EPCIP antisense RNA 1 Neighboring gene exosomal polycystin 1 interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. The recurrent mutation Arg258Gln in SYNJ1 (PARK20) is not a common cause of Parkinson's disease. Winkler S, et al. J Neurol, 2014 Apr. PMID 24609975
    2. Alteration of endosomal trafficking is associated with early-onset parkinsonism caused by SYNJ1 mutations. Fasano D, et al. Cell Death Dis, 2018 Mar 7. PMID 29515184, Free PMC Article
    3. Identification of putative second genetic hits in schizophrenia carriers of high-risk copy number variants and resequencing in additional samples. Rodríguez-López J, et al. Eur Arch Psychiatry Clin Neurosci, 2018 Sep. PMID 28421333
    4. A Novel SYNJ1 Mutation in a Tunisian Family with Juvenile Parkinson's Disease Associated with Epilepsy. Ben Romdhan S, et al. J Mol Neurosci, 2018 Oct. PMID 30187305
    5. Identification of a novel homozygous mutation Arg459Pro in SYNJ1 gene of an Indian family with autosomal recessive juvenile Parkinsonism. Kirola L, et al. Parkinsonism Relat Disord, 2016 Oct. PMID 27496670

    See all (99) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. alpha-Synuclein induces deficiency in clathrin-mediated endocytosis through inhibiting synaptojanin1 expression.
      Title: α-Synuclein induces deficiency in clathrin-mediated endocytosis through inhibiting synaptojanin1 expression.
    2. Asparagine endopeptidase cleaves synaptojanin 1 and triggers synaptic dysfunction in Parkinson's disease.
      Title: Asparagine endopeptidase cleaves synaptojanin 1 and triggers synaptic dysfunction in Parkinson's disease.
    3. The lipid phosphatase Synaptojanin 1 undergoes a significant alteration in expression and solubility and is associated with brain lesions in Alzheimer's disease.
      Title: The lipid phosphatase Synaptojanin 1 undergoes a significant alteration in expression and solubility and is associated with brain lesions in Alzheimer's disease.
    4. A structure of substrate-bound Synaptojanin1 provides new insights in its mechanism and the effect of disease mutations.
      Title: A structure of substrate-bound Synaptojanin1 provides new insights in its mechanism and the effect of disease mutations.
    5. TGFbeta receptor endocytosis and Smad signaling require synaptojanin1, PI3K-C2alpha-, and INPP4B-mediated phosphoinositide conversions.
      Title: TGFβ receptor endocytosis and Smad signaling require synaptojanin1, PI3K-C2α-, and INPP4B-mediated phosphoinositide conversions.
    6. A novel homozygous SYNJ1 mutation in two siblings with typical Parkinson's disease.
      Title: A novel homozygous SYNJ1 mutation in two siblings with typical Parkinson's disease.
    7. SYNJ1 contributes to memory deficits in the aging hippocampus in all forms of Alzheimer's disease.
      Title: Excess Synaptojanin 1 Contributes to Place Cell Dysfunction and Memory Deficits in the Aging Hippocampus in Three Types of Alzheimer's Disease.
    8. Data indicate that Synj1 plays a crucial role in regulating the homeostasis and functions of early endosomal compartments in different cell types, and highlight defective cellular pathways in PARK20. In addition, they strengthen the link between endosomal trafficking and Parkinson's disease.
      Title: Alteration of endosomal trafficking is associated with early-onset parkinsonism caused by SYNJ1 mutations.
    9. A novel mutation in the C-terminal domain identified in family members with juvenile PD and epilepsy.
      Title: A Novel SYNJ1 Mutation in a Tunisian Family with Juvenile Parkinson's Disease Associated with Epilepsy.
    10. Excess of rare putative functional variants at SYNJ1 in schizophrenia.
      Title: Identification of putative second genetic hits in schizophrenia carriers of high-risk copy number variants and resequencing in additional samples.
    Submit: New GeneRIF Correction See all GeneRIFs (29)

    Phenotypes

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    Find tests for this gene in the NIH Genetic Testing Registry (GTR)

    Review eQTL and phenotype association data in this region using PheGenI

    Associated conditions

    Description Tests
    Developmental and epileptic encephalopathy, 53
    MedGen: C4479313 OMIM: 617389 GeneReviews: Not available
    		Compare labs
    Early-onset Parkinson disease 20
    MedGen: C3809824 OMIM: 615530 GeneReviews: Not available
    		Compare labs

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables inositol-1,4,5-trisphosphate 5-phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables inositol-1,4,5-trisphosphate 5-phosphatase activity TAS
    Traceable Author Statement
    more info
    		  
    enables phosphatidylinositol phosphate 4-phosphatase activity TAS
    Traceable Author Statement
    more info
    		  
    enables phosphatidylinositol phosphate 5-phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity TAS
    Traceable Author Statement
    more info
    		  
    enables phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity TAS
    Traceable Author Statement
    more info
    		  
    enables phosphatidylinositol-3-phosphate phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phosphatidylinositol-3-phosphate phosphatase activity TAS
    Traceable Author Statement
    more info
    		  
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity TAS
    Traceable Author Statement
    more info
    		  
    enables phosphatidylinositol-4-phosphate phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in inositol phosphate metabolic process TAS
    Traceable Author Statement
    more info
    		  
    involved_in learning IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in membrane organization TAS
    Traceable Author Statement
    more info
    		  
    involved_in neurotransmitter transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in phosphatidylinositol biosynthetic process TAS
    Traceable Author Statement
    more info
    		  
    involved_in phosphatidylinositol dephosphorylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in phosphatidylinositol dephosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in phosphatidylinositol dephosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in phosphatidylinositol metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in phosphatidylinositol-3-phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in positive regulation of endosome organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in synaptic vesicle endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in synaptic vesicle endocytosis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in synaptic vesicle endocytosis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in synaptic vesicle priming ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in synaptic vesicle transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in synaptic vesicle uncoating ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of clathrin coat of coated pit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol TAS
    Traceable Author Statement
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of membrane coat ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    colocalizes_with microtubule ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    is_active_in perinuclear region of cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in perinuclear region of cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in presynapse IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in presynapse IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in synaptic membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in terminal bouton ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in vesicle membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    synaptojanin-1
    Names
    inositol 5'-phosphatase (synaptojanin 1)
    inositol polyphosphate-5-phosphatase G
    phosphoinositide 5-phosphatase
    synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1
    synaptojanin-1, polyphosphoinositide phosphatase
    NP_001153774.1
    NP_001153778.1
    NP_003886.3
    NP_982271.3
    XP_016883984.1
    XP_016883986.1
    XP_016883988.1
    XP_047296990.1
    XP_047296991.1
    XP_047296992.1
    XP_047296993.1
    XP_047296994.1
    XP_047296995.1
    XP_047296996.1
    XP_047296997.1
    XP_047296998.1
    XP_047296999.1
    XP_047297000.1
    XP_047297001.1
    XP_047297002.1
    XP_047297003.1
    XP_047297004.1
    XP_047297005.1
    XP_047297006.1
    XP_054180906.1
    XP_054180907.1
    XP_054180908.1
    XP_054180909.1
    XP_054180910.1
    XP_054180911.1
    XP_054180912.1
    XP_054180913.1
    XP_054180914.1
    XP_054180915.1
    XP_054180916.1
    XP_054180917.1
    XP_054180918.1
    XP_054180919.1
    XP_054180920.1
    XP_054180921.1
    XP_054180922.1
    XP_054180923.1
    XP_054180924.1
    XP_054180925.1

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_030017.2 RefSeqGene

      Range
      5027..104277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001160302.2 → NP_001153774.1  synaptojanin-1 isoform c

      See identical proteins and their annotated locations for NP_001153774.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) differs in its 5' UTR, 5' coding region and 3' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (c) has a shorter N-terminus, a distinct C-terminus, and is shorter than isoform a.
      Source sequence(s)
      AP000275, AP000276, AP000277, AP000278, AP000279
      Consensus CDS
      CCDS54483.1
      UniProtKB/TrEMBL
      J3KPK1
      Related
      ENSP00000349903.3, ENST00000357345.7
      Conserved Domains (5) summary
      cd09098
      Location:533 → 868
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PRK05641
      Location:1017 → 1097
      PRK05641; putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
      pfam02383
      Location:60 → 340
      Syja_N; SacI homology domain
      pfam08952
      Location:867 → 1008
      DUF1866; Domain of unknown function (DUF1866)
      pfam11235
      Location:1078 → 1262
      Med25_SD1; Mediator complex subunit 25 synapsin 1

    2. NM_001160306.2 → NP_001153778.1  synaptojanin-1 isoform d

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR, uses a downstream translational start codon, and has multiple differences in the coding region, compared to variant 1. The encoded isoform (d) has a shorter N-terminus, a distinct C-terminus, and is shorter than isoform a.
      Source sequence(s)
      AB020717, BC098395, BC136603, BP350252, CA944966
      Consensus CDS
      CCDS54484.1
      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1
      UniProtKB/TrEMBL
      A0A0D9SGJ6
      Related
      ENSP00000487560.1, ENST00000630077.3
      Conserved Domains (4) summary
      cd09098
      Location:528 → 863
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      pfam02383
      Location:60 → 340
      Syja_N; SacI homology domain
      pfam08952
      Location:862 → 1003
      DUF1866; Domain of unknown function (DUF1866)
      pfam11235
      Location:1054 → 1231
      Med25_SD1; Mediator complex subunit 25 synapsin 1

    3. NM_003895.4 → NP_003886.3  synaptojanin-1 isoform a

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) encodes the longest isoform (a).
      Source sequence(s)
      AP000275, AP000276, AP000277, AP000278, AP000279
      Consensus CDS
      CCDS33539.2
      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1
      UniProtKB/TrEMBL
      J3KQV8
      Related
      ENSP00000409667.2, ENST00000433931.7
      Conserved Domains (3) summary
      cd09098
      Location:572 → 907
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      pfam02383
      Location:99 → 379
      Syja_N; SacI homology domain
      pfam08952
      Location:906 → 1047
      DUF1866; Domain of unknown function (DUF1866)

    4. NM_203446.3 → NP_982271.3  synaptojanin-1 isoform b

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) includes an alternate exon in the 3' coding region that causes a frameshift, compared to variant 1. The encoded isoform (b) has a distinct and shorter C-terminus, compared to isoform a.
      Source sequence(s)
      AB020717, AF009039, AF009040, AP000275, AP000279, BC019630
      Consensus CDS
      CCDS33540.3
      UniProtKB/TrEMBL
      J3KPK1
      Related
      ENSP00000501530.1, ENST00000674351.1
      Conserved Domains (4) summary
      cd09098
      Location:533 → 868
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:1054 → 1278
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:34 → 480
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam08952
      Location:867 → 1008
      DUF1866; Domain of unknown function (DUF1866)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

      Range
      32628759..32728394 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047441038.1 → XP_047296994.1  synaptojanin-1 isoform X8

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    2. XM_017028497.3 → XP_016883986.1  synaptojanin-1 isoform X3

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1
      Conserved Domains (4) summary
      cd09098
      Location:572 → 907
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:1098 → 1491
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:73 → 519
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam08952
      Location:906 → 1047
      DUF1866; Domain of unknown function (DUF1866)

    3. XM_017028499.3 → XP_016883988.1  synaptojanin-1 isoform X7

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    4. XM_047441036.1 → XP_047296992.1  synaptojanin-1 isoform X5

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    5. XM_017028495.3 → XP_016883984.1  synaptojanin-1 isoform X1

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    6. XM_047441037.1 → XP_047296993.1  synaptojanin-1 isoform X6

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    7. XM_047441035.1 → XP_047296991.1  synaptojanin-1 isoform X4

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    8. XM_047441034.1 → XP_047296990.1  synaptojanin-1 isoform X2

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    9. XM_047441039.1 → XP_047296995.1  synaptojanin-1 isoform X9

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    10. XM_047441040.1 → XP_047296996.1  synaptojanin-1 isoform X10

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    11. XM_047441041.1 → XP_047296997.1  synaptojanin-1 isoform X11

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    12. XM_047441047.1 → XP_047297003.1  synaptojanin-1 isoform X17

      UniProtKB/TrEMBL
      J3KPK1
      Related
      ENSP00000371931.4, ENST00000382491.7

    13. XM_047441046.1 → XP_047297002.1  synaptojanin-1 isoform X16

      UniProtKB/TrEMBL
      J3KPK1

    14. XM_047441050.1 → XP_047297006.1  synaptojanin-1 isoform X20

      UniProtKB/TrEMBL
      J3KPK1

    15. XM_047441045.1 → XP_047297001.1  synaptojanin-1 isoform X15

      UniProtKB/TrEMBL
      J3KPK1

    16. XM_047441043.1 → XP_047296999.1  synaptojanin-1 isoform X13

      UniProtKB/TrEMBL
      C9JFZ1, J3KPK1
      Related
      ENSP00000371939.2, ENST00000382499.7

    17. XM_047441048.1 → XP_047297004.1  synaptojanin-1 isoform X18

      UniProtKB/TrEMBL
      J3KPK1

    18. XM_047441044.1 → XP_047297000.1  synaptojanin-1 isoform X14

      UniProtKB/TrEMBL
      J3KPK1

    19. XM_047441042.1 → XP_047296998.1  synaptojanin-1 isoform X12

      UniProtKB/TrEMBL
      J3KPK1

    20. XM_047441049.1 → XP_047297005.1  synaptojanin-1 isoform X19

      UniProtKB/TrEMBL
      J3KPK1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060945.1 Alternate T2T-CHM13v2.0

      Range
      30994760..31094413 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054324938.1 → XP_054180913.1  synaptojanin-1 isoform X8

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    2. XM_054324933.1 → XP_054180908.1  synaptojanin-1 isoform X3

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    3. XM_054324937.1 → XP_054180912.1  synaptojanin-1 isoform X7

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    4. XM_054324935.1 → XP_054180910.1  synaptojanin-1 isoform X5

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    5. XM_054324931.1 → XP_054180906.1  synaptojanin-1 isoform X1

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    6. XM_054324936.1 → XP_054180911.1  synaptojanin-1 isoform X6

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    7. XM_054324934.1 → XP_054180909.1  synaptojanin-1 isoform X4

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    8. XM_054324932.1 → XP_054180907.1  synaptojanin-1 isoform X2

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    9. XM_054324939.1 → XP_054180914.1  synaptojanin-1 isoform X9

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    10. XM_054324940.1 → XP_054180915.1  synaptojanin-1 isoform X10

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    11. XM_054324941.1 → XP_054180916.1  synaptojanin-1 isoform X11

      UniProtKB/Swiss-Prot
      O43425, O43426, O94984, Q4KMR1

    12. XM_054324947.1 → XP_054180922.1  synaptojanin-1 isoform X17

      UniProtKB/TrEMBL
      J3KPK1

    13. XM_054324946.1 → XP_054180921.1  synaptojanin-1 isoform X16

      UniProtKB/TrEMBL
      J3KPK1

    14. XM_054324950.1 → XP_054180925.1  synaptojanin-1 isoform X20

      UniProtKB/TrEMBL
      J3KPK1

    15. XM_054324945.1 → XP_054180920.1  synaptojanin-1 isoform X15

      UniProtKB/TrEMBL
      J3KPK1

    16. XM_054324943.1 → XP_054180918.1  synaptojanin-1 isoform X13

      UniProtKB/TrEMBL
      C9JFZ1, J3KPK1

    17. XM_054324948.1 → XP_054180923.1  synaptojanin-1 isoform X18

      UniProtKB/TrEMBL
      J3KPK1

    18. XM_054324944.1 → XP_054180919.1  synaptojanin-1 isoform X14

      UniProtKB/TrEMBL
      J3KPK1

    19. XM_054324942.1 → XP_054180917.1  synaptojanin-1 isoform X12

      UniProtKB/TrEMBL
      J3KPK1

    20. XM_054324949.1 → XP_054180924.1  synaptojanin-1 isoform X19

      UniProtKB/TrEMBL
      J3KPK1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O43426.2 GenPept UniProtKB/Swiss-Prot:O43426

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