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    SAUR15 SAUR-like auxin-responsive protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830040, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SAUR15
    Official Full Name
    SAUR-like auxin-responsive protein family
    Primary source
    TAIR:AT4G38850
    Locus tag
    AT4G38850
    See related
    Araport:AT4G38850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS COLUMBIA SAUR GENE 1; ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15; ATSAUR15; F19H22.6; SAUR-AC1; SAUR_AC1; SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA; SMALL AUXIN UPREGULATED 15
    Summary
    mRNA is rapidly induced by auxin and is very short-lived. Has been used as a reporter gene in studying auxin mutants.
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    Genomic context

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    See SAUR15 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (18126057..18126829)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 26 Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene ncRNA Neighboring gene SAUR-like auxin-responsive protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic variations in ZmSAUR15 contribute to the formation of immature embryo-derived embryonic calluses in maize. Wang Y, et al. Plant J, 2022 Feb. PMID 34822726
    2. Bipartite promoter element required for auxin response. Walcher CL, et al. Plant Physiol, 2012 Jan. PMID 22100645, Free PMC Article
    3. Characterization of the auxin-inducible SAUR-AC1 gene for use as a molecular genetic tool in Arabidopsis. Gil P, et al. Plant Physiol, 1994 Feb. PMID 8159792, Free PMC Article
    4. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Genetic variations in ZmSAUR15 contribute to the formation of immature embryo-derived embryonic calluses in maize.
      Title: Genetic variations in ZmSAUR15 contribute to the formation of immature embryo-derived embryonic calluses in maize.
    2. A Short Promoter Region Is Sufficient for Normal Auxin Response and Localization of SAUR15
      Title: Bipartite promoter element required for auxin response.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_120045.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SAUR-like auxin-responsive protein family
    NP_195596.1
    • SMALL AUXIN UPREGULATED 15 (SAUR15); CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18050.1); Has 1222 Blast hits to 1213 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1221; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18126057..18126829
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120045.3 → NP_195596.1  SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195596.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q41220
      UniProtKB/TrEMBL
      A0A178UUZ8, A0A5S9XZV8
      Conserved Domains (1) summary
      cl23790
      Location:15 → 89
      Auxin_inducible; Auxin responsive protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q41220.1

    Gene LinkOut

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