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    LOC8066904 ruBisCO large subunit-binding protein subunit beta, chloroplastic [ Sorghum bicolor (sorghum) ]

    Gene ID: 8066904, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC8066904
    Gene description
    ruBisCO large subunit-binding protein subunit beta, chloroplastic
    Locus tag
    SORBI_3010G011200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorghum bicolor
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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    Genomic context

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    See LOC8066904 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 10 NC_012879.2 (976891..981911, complement)

    Chromosome 10 - NC_012879.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8066900 Neighboring gene uncharacterized LOC8067919 Neighboring gene uncharacterized LOC110430722 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene uncharacterized LOC110430802

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012879.2 Chromosome 10 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ruBisCO large subunit-binding protein subunit beta, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Genomic

    1. NC_012879.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

      Range
      976891..981911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002437664.2 → XP_002437709.1  ruBisCO large subunit-binding protein subunit beta, chloroplastic

      See identical proteins and their annotated locations for XP_002437709.1

      UniProtKB/TrEMBL
      A0A921Q152, C5Z2S4
      Conserved Domains (1) summary
      PLN03167
      Location:1 → 579
      PLN03167; Chaperonin-60 beta subunit; Provisional
    Nucleotide Protein
    Heading Accession and Version

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