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    LRSAM1 leucine rich repeat and sterile alpha motif containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700704, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRSAM1provided by VGNC
    Official Full Name
    leucine rich repeat and sterile alpha motif containing 1provided by VGNC
    Primary source
    VGNC:VGNC:74353
    Locus tag
    EGK_07863
    See related
    Ensembl:ENSMMUG00000009956
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRSAM1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (13110411..13163238, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (11421114..11475732, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672623 Neighboring gene niban apoptosis regulator 2 Neighboring gene small nucleolar RNA SNORA65 Neighboring gene ribosomal protein L12 Neighboring gene zinc finger protein 79

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase LRSAM1
    XP_014972273.2
    XP_014972274.2
    XP_014972275.2
    XP_014972276.2
    XP_014972278.2
    XP_028690632.1
    XP_028690633.1
    XP_028690635.1
    XP_028690636.1
    XP_028690637.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      13110411..13163238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834802.1 → XP_028690635.1  E3 ubiquitin-protein ligase LRSAM1 isoform X5

      UniProtKB/TrEMBL
      A0A5F8AK09
      Conserved Domains (5) summary
      cd09523
      Location:541 → 605
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:33 → 155
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:33 → 54
      LRR_1; leucine-rich repeat [structural motif]
      cd16515
      Location:648 → 687
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:203 → 507
      DUF5401; Family of unknown function (DUF5401)

    2. XM_015116792.2 → XP_014972278.2  E3 ubiquitin-protein ligase LRSAM1 isoform X6

      UniProtKB/TrEMBL
      A0A5F8AK09, F6TTT5
      Related
      ENSMMUP00000038874.3, ENSMMUT00000045829.3
      Conserved Domains (5) summary
      cd09523
      Location:540 → 604
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:65 → 181
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:33 → 54
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:647 → 686
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:244 → 475
      DUF5401; Family of unknown function (DUF5401)

    3. XM_015116789.2 → XP_014972275.2  E3 ubiquitin-protein ligase LRSAM1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AK09, H9EV32
      Related
      ENSMMUP00000075755.1, ENSMMUT00000081707.1
      Conserved Domains (5) summary
      cd09523
      Location:567 → 631
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:65 → 181
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:33 → 54
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:674 → 713
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:229 → 533
      DUF5401; Family of unknown function (DUF5401)

    4. XM_015116790.2 → XP_014972276.2  E3 ubiquitin-protein ligase LRSAM1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8AK09
      Conserved Domains (5) summary
      cd09523
      Location:550 → 614
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:75 → 191
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:33 → 54
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:657 → 696
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:254 → 485
      DUF5401; Family of unknown function (DUF5401)

    5. XM_015116787.2 → XP_014972273.2  E3 ubiquitin-protein ligase LRSAM1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AK09
      Conserved Domains (5) summary
      cd09523
      Location:577 → 641
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:75 → 191
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:33 → 54
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:684 → 723
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:239 → 543
      DUF5401; Family of unknown function (DUF5401)

    6. XM_028834803.1 → XP_028690636.1  E3 ubiquitin-protein ligase LRSAM1 isoform X6

      UniProtKB/TrEMBL
      A0A5F8AK09, F6TTT5
      Related
      ENSMMUP00000013026.4, ENSMMUT00000013902.4
      Conserved Domains (5) summary
      cd09523
      Location:540 → 604
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:65 → 181
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:33 → 54
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:647 → 686
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:244 → 475
      DUF5401; Family of unknown function (DUF5401)

    7. XM_028834799.1 → XP_028690632.1  E3 ubiquitin-protein ligase LRSAM1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AK09, H9EV32
      Related
      ENSMMUP00000077279.1, ENSMMUT00000092351.1
      Conserved Domains (5) summary
      cd09523
      Location:567 → 631
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:65 → 181
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:33 → 54
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:674 → 713
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:229 → 533
      DUF5401; Family of unknown function (DUF5401)

    8. XM_028834804.1 → XP_028690637.1  E3 ubiquitin-protein ligase LRSAM1 isoform X7

      UniProtKB/TrEMBL
      A0A5F8AK09
      Conserved Domains (5) summary
      cd09523
      Location:535 → 599
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:60 → 176
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:53 → 74
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:642 → 681
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:239 → 470
      DUF5401; Family of unknown function (DUF5401)

    9. XM_028834800.1 → XP_028690633.1  E3 ubiquitin-protein ligase LRSAM1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AK09
      Conserved Domains (5) summary
      cd09523
      Location:562 → 626
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:60 → 176
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:53 → 74
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:669 → 708
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:224 → 528
      DUF5401; Family of unknown function (DUF5401)

    10. XM_015116788.2 → XP_014972274.2  E3 ubiquitin-protein ligase LRSAM1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AK09
      Conserved Domains (5) summary
      cd09523
      Location:577 → 641
      SAM_TAL; SAM domain of TAL subfamily
      COG4886
      Location:75 → 191
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:33 → 54
      LRR_RI; leucine-rich repeat [structural motif]
      cd16515
      Location:684 → 723
      RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
      pfam17380
      Location:239 → 543
      DUF5401; Family of unknown function (DUF5401)
    Nucleotide Protein
    Heading Accession and Version

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