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    fni type 2 isopentenyl-diphosphate Delta-isomerase [ Staphylococcus lugdunensis ]

    Gene ID: 58091392, updated on 3-Mar-2024

    Summary

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    Gene symbol
    fni
    Gene description
    type 2 isopentenyl-diphosphate Delta-isomerase
    Locus tag
    AL499_RS10015
    Gene type
    protein coding
    Organism
    Staphylococcus lugdunensis (strain: FDAARGOS_141, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_141)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
    Old locus tag
    AL499_10020
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    Genomic context

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    NZ_CP014022.1Genomic Context describing neighboring genes Neighboring gene thioesterase family protein Neighboring gene magnesium/cobalt transporter CorA Neighboring gene DNA-3-methyladenine glycosylase Neighboring gene helix-turn-helix transcriptional regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP014022.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human commensals producing a novel antibiotic impair pathogen colonization. Zipperer A, et al. Nature, 2016 Jul 28. PMID 27466123
    2. Kinetic and Binding Studies of Streptococcus pneumoniae Type 2 Isopentenyl Diphosphate:Dimethylallyl Diphosphate Isomerase. Janczak MW, et al. Biochemistry, 2016 Apr 19. PMID 27003727
    3. Overexpression, physicochemical characterization, and modeling of a hyperthermophilic pyrococcus furiosus type 2 IPP isomerase. Dutoit R, et al. Proteins, 2008 Jun. PMID 18076031
    4. Bacillus subtilis ypgA gene is fni, a nonessential gene encoding type 2 isopentenyl diphosphate isomerase. Takagi M, et al. Biosci Biotechnol Biochem, 2004 Jan. PMID 14745175

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type 2 isopentenyl-diphosphate Delta-isomerase
    WP_002460158.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP014022.1 Reference assembly

      Range
      2155356..2156408
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002460158.1 MULTISPECIES: type 2 isopentenyl-diphosphate Delta-isomerase [Staphylococcus]

      UniProtKB/TrEMBL
      A0A133QB01, A0A853V4X2
      Conserved Domains (1) summary
      PRK05437
      Location:1 → 345
      PRK05437; isopentenyl pyrophosphate isomerase; Provisional
    Nucleotide Protein
    Heading Accession and Version