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    LOC132419204 sex-determining region Y protein [ Delphinus delphis (saddleback dolphin) ]

    Gene ID: 132419204, updated on 29-Oct-2024

    Summary

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    Gene symbol
    LOC132419204
    Gene description
    sex-determining region Y protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Delphinus delphis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Delphinus
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    Genomic context

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    See LOC132419204 in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_10 current mDelDel1.2 (GCF_949987515.2) Y NC_082705.1 (3371083..3371734)
    RS_2023_09 previous assembly mDelDel1.1 (GCF_949987515.1) Y NC_082705.1 (3371083..3371688)

    Chromosome Y - NC_082705.1Genomic Context describing neighboring genes Neighboring gene protein SSXT-like Neighboring gene sex-determining region Y protein-like Neighboring gene testis-specific Y-encoded protein 2-like Neighboring gene spermine synthase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in male sex determination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: sex-determining region Y protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_949987515.2-RS_2024_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mDelDel1.2

    Genomic

    1. NC_082705.1 Reference mDelDel1.2

      Range
      3371083..3371734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060003180.2 → XP_059859163.2  LOW QUALITY PROTEIN: sex-determining region Y protein

    Nucleotide Protein
    Heading Accession and Version