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    LOC122711914 bleomycin hydrolase [ Apis laboriosa (Himalayan honeybee) ]

    Gene ID: 122711914, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC122711914
    Gene description
    bleomycin hydrolase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis laboriosa
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See LOC122711914 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM1406632v1 (GCF_014066325.1) Unplaced Scaffold NW_025220865.1 (6163004..6165891)

    NW_025220865.1Genomic Context describing neighboring genes Neighboring gene glutathione synthetase-like Neighboring gene DNA polymerase delta interacting protein 2 Neighboring gene uncharacterized protein F58A4.6 Neighboring gene proline dehydrogenase slgA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025220865 Unplaced Scaffold Reference ASM1406632v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type aminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homocysteine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to toxic substance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bleomycin hydrolase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis laboriosa Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1406632v1 Primary Assembly

    Genomic

    1. NW_025220865.1 Reference ASM1406632v1 Primary Assembly

      Range
      6163004..6165891
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043931100.1 → XP_043787035.1  bleomycin hydrolase isoform X1

      Conserved Domains (1) summary
      cd00585
      Location:8 → 452
      Peptidase_C1B; Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC). The proteins of this subfamily contain a large insert relative to the C1A peptidase (papain) subfamily. BH is ...

    2. XM_043931108.1 → XP_043787043.1  bleomycin hydrolase isoform X2

      Conserved Domains (1) summary
      cd00585
      Location:7 → 451
      Peptidase_C1B; Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC). The proteins of this subfamily contain a large insert relative to the C1A peptidase (papain) subfamily. BH is ...
    Nucleotide Protein
    Heading Accession and Version

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