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    RNF43 ring finger protein 43 [ Theropithecus gelada (gelada) ]

    Gene ID: 112608991, updated on 15-Mar-2024

    Summary

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    Gene symbol
    RNF43
    Gene description
    ring finger protein 43
    See related
    Ensembl:ENSTGEG00000022650
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theropithecus gelada
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
    Orthologs
    human mouse all
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    Genomic context

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    See RNF43 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Tgel_1.0 (GCF_003255815.1) 16 NC_037684.1 (15288731..15355380)

    Chromosome 16 - NC_037684.1Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 4 Neighboring gene protein SET-like Neighboring gene heat shock transcription factor 5 Neighboring gene uncharacterized LOC112608994 Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene TSPO associated protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037684.1 Chromosome 16 Reference Tgel_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables frizzled binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Wnt receptor catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF43

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tgel_1.0 Primary Assembly

    Genomic

    1. NC_037684.1 Reference Tgel_1.0 Primary Assembly

      Range
      15288731..15355380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025361219.1 → XP_025217004.1  E3 ubiquitin-protein ligase RNF43 isoform X1

      UniProtKB/TrEMBL
      A0A8D2FXN0, A0A8D2G0X1
      Related
      ENSTGEP00000028177.1, ENSTGET00000033577.1
      Conserved Domains (2) summary
      cd16798
      Location:270 → 316
      RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
      cl26464
      Location:354 → 769
      Atrophin-1; Atrophin-1 family

    2. XM_025361221.1 → XP_025217006.1  E3 ubiquitin-protein ligase RNF43 isoform X2

      UniProtKB/TrEMBL
      A0A8D2G083, A0A8D2G0X1
      Related
      ENSTGEP00000028178.1, ENSTGET00000033578.1
      Conserved Domains (2) summary
      cd16798
      Location:229 → 275
      RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
      cl26464
      Location:313 → 728
      Atrophin-1; Atrophin-1 family

    3. XM_025361218.1 → XP_025217003.1  E3 ubiquitin-protein ligase RNF43 isoform X1

      UniProtKB/TrEMBL
      A0A8D2FXN0, A0A8D2G0X1
      Conserved Domains (2) summary
      cd16798
      Location:270 → 316
      RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
      cl26464
      Location:354 → 769
      Atrophin-1; Atrophin-1 family

    4. XM_025361220.1 → XP_025217005.1  E3 ubiquitin-protein ligase RNF43 isoform X1

      UniProtKB/TrEMBL
      A0A8D2FXN0, A0A8D2G0X1
      Conserved Domains (2) summary
      cd16798
      Location:270 → 316
      RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
      cl26464
      Location:354 → 769
      Atrophin-1; Atrophin-1 family

    5. XM_025361222.1 → XP_025217007.1  E3 ubiquitin-protein ligase RNF43 isoform X3

      UniProtKB/TrEMBL
      A0A8D2G0X1
      Related
      ENSTGEP00000028184.1, ENSTGET00000033585.1
      Conserved Domains (2) summary
      cd16798
      Location:143 → 189
      RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
      cl26464
      Location:227 → 642
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein
    Heading Accession and Version

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