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    LOC112289258 protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog [ Physcomitrium patens ]

    Gene ID: 112289258, updated on 20-Sep-2024

    Summary

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    Gene symbol
    LOC112289258
    Gene description
    protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog
    Locus tag
    PHYPA_016307
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Physcomitrium patens
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
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    Genomic context

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    See LOC112289258 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Phypa V3 (GCF_000002425.4) 12 NC_037264.1 (10012447..10015908, complement)

    Chromosome 12 - NC_037264.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-delta-like Neighboring gene AP-4 complex subunit epsilon-like Neighboring gene ADP-ribosylation factor 2-like Neighboring gene beta-hexosaminidase 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037264.1 Chromosome 12 Reference Phypa V3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Phypa V3 Primary Assembly

    Genomic

    1. NC_037264.1 Reference Phypa V3 Primary Assembly

      Range
      10012447..10015908 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024534334.1 → XP_024390102.1  protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog isoform X2

      UniProtKB/TrEMBL
      A0A2K1JQW1, A0A7I4ABD3
      Conserved Domains (1) summary
      cd00060
      Location:118 → 207
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

    2. XM_024534332.1 → XP_024390100.1  protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog isoform X1

      UniProtKB/TrEMBL
      A0A7I4ABD3, A0A7I4ADR0
      Conserved Domains (1) summary
      cd00060
      Location:118 → 207
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

    3. XM_024534335.1 → XP_024390103.1  protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog isoform X3

      UniProtKB/TrEMBL
      A0A7I4ABD3
      Conserved Domains (1) summary
      cd00060
      Location:76 → 165
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    Nucleotide Protein
    Heading Accession and Version

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