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    Arf51F ADP-ribosylation factor 6 [ Agrilus planipennis (emerald ash borer) ]

    Gene ID: 108733786, updated on 24-May-2024

    Summary

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    Gene symbol
    Arf51F
    Gene description
    ADP-ribosylation factor 6
    See related
    EnsemblRapid:LOC108733786
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Agrilus planipennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
    Orthologs
    fruit fly all
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    Genomic context

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    See Arf51F in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020440736.1 (1062054..1063135, complement)
    100 previous assembly Apla_1.0 (GCF_000699045.1) Unplaced Scaffold NW_017259643.1 (1063385..1064466, complement)

    NW_020440736.1Genomic Context describing neighboring genes Neighboring gene MAP kinase-activated protein kinase 2 Neighboring gene protein patched Neighboring gene chondroitin sulfate proteoglycan 4-like protein Neighboring gene Cullin-associated and neddylation-dissociated 1 Neighboring gene protein phosphatase 1H

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Apla_2.0 Primary Assembly

    Genomic

    1. NW_020440736.1 Reference Apla_2.0 Primary Assembly

      Range
      1062054..1063135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018465095.1 → XP_018320597.1  ADP-ribosylation factor 6

      UniProtKB/TrEMBL
      A0A1W4WJG0
      Related
      XP_018320597.1, XM_018465095.1
      Conserved Domains (1) summary
      cl38936
      Location:1 → 174
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. XM_018465096.1 → XP_018320598.1  ADP-ribosylation factor 6

      UniProtKB/TrEMBL
      A0A1W4WJG0
      Related
      XP_018320598.1, XM_018465096.1
      Conserved Domains (1) summary
      cl38936
      Location:1 → 174
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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