U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC108684467 uncharacterized LOC108684467 [ Atta colombica ]

    Gene ID: 108684467, updated on 1-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC108684467
    Gene description
    uncharacterized LOC108684467
    Locus tag
    ALC53_00326
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Atta colombica
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
    Orthologs
    honey bee all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC108684467 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Acol1.0 (GCF_001594045.1) Unplaced Scaffold NW_017259184.1 (510925..521195, complement)

    NW_017259184.1Genomic Context describing neighboring genes Neighboring gene ribosomal silencing factor RsfS-like protein, 312 Neighboring gene syntaxin 18 Neighboring gene RCC1 and BTB domain-containing protein 1-like Neighboring gene prohibitin 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_017259184.1 Unplaced Scaffold Reference Acol1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC108684467
    Names
    Tumor suppressor p53-binding protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Atta colombica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Acol1.0

    Genomic

    1. NW_017259184.1 Reference Acol1.0

      Range
      510925..521195 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018188795.1 → XP_018044284.1  uncharacterized protein LOC108684467 isoform X1

      UniProtKB/TrEMBL
      A0A195BYT6

    2. XM_018188803.1 → XP_018044292.1  uncharacterized protein LOC108684467 isoform X2

    3. XM_018188813.1 → XP_018044302.1  uncharacterized protein LOC108684467 isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases