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    PHF6 PHD finger protein 6 [ Leptonychotes weddellii (Weddell seal) ]

    Gene ID: 102732807, updated on 10-Mar-2024

    Summary

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    Gene symbol
    PHF6
    Gene description
    PHD finger protein 6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Leptonychotes weddellii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
    Orthologs
    human mouse all
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    Genomic context

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    See PHF6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006384929.1 (256711..304704, complement)

    NW_006384929.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115944742 Neighboring gene hypoxanthine-guanine phosphoribosyltransferase Neighboring gene uncharacterized LOC115944743 Neighboring gene coiled-coil domain containing 160

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006384929 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LepWed1.0 Primary Assembly

    Genomic

    1. NW_006384929.1 Reference LepWed1.0 Primary Assembly

      Range
      256711..304704 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006744875.2 → XP_006744938.1  PHD finger protein 6 isoform X2

      See identical proteins and their annotated locations for XP_006744938.1

      UniProtKB/TrEMBL
      A0A2U3YMI5
      Conserved Domains (2) summary
      cd15710
      Location:17 → 131
      ePHD1_PHF6; Extended PHD finger 1 found in PHD finger protein 6 (PHF6)
      cd15711
      Location:212 → 329
      ePHD2_PHF6; Extended PHD finger 2 found in PHD finger protein 6 (PHF6)

    2. XM_031040833.1 → XP_030896693.1  PHD finger protein 6 isoform X5

      UniProtKB/TrEMBL
      A0A7F8RUX7
      Conserved Domains (2) summary
      cd15711
      Location:133 → 250
      ePHD2_PHF6; Extended PHD finger 2 found in PHD finger protein 6 (PHF6)
      cl22851
      Location:1 → 51
      PHD_SF; PHD finger superfamily

    3. XM_031040831.1 → XP_030896691.1  PHD finger protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A2U3YMJ3
      Conserved Domains (2) summary
      cd15710
      Location:17 → 131
      ePHD1_PHF6; Extended PHD finger 1 found in PHD finger protein 6 (PHF6)
      cd15711
      Location:213 → 330
      ePHD2_PHF6; Extended PHD finger 2 found in PHD finger protein 6 (PHF6)

    4. XM_006744874.2 → XP_006744937.1  PHD finger protein 6 isoform X1

      See identical proteins and their annotated locations for XP_006744937.1

      UniProtKB/TrEMBL
      A0A2U3YMJ3
      Conserved Domains (2) summary
      cd15710
      Location:17 → 131
      ePHD1_PHF6; Extended PHD finger 1 found in PHD finger protein 6 (PHF6)
      cd15711
      Location:213 → 330
      ePHD2_PHF6; Extended PHD finger 2 found in PHD finger protein 6 (PHF6)

    5. XM_031040832.1 → XP_030896692.1  PHD finger protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A7F8RTA1
      Conserved Domains (2) summary
      cd15710
      Location:17 → 131
      ePHD1_PHF6; Extended PHD finger 1 found in PHD finger protein 6 (PHF6)
      cl22851
      Location:213 → 325
      PHD_SF; PHD finger superfamily

    6. XM_006744879.2 → XP_006744942.1  PHD finger protein 6 isoform X4

      See identical proteins and their annotated locations for XP_006744942.1

      UniProtKB/TrEMBL
      A0A2U3YMJ8
      Conserved Domains (2) summary
      cd15710
      Location:17 → 131
      ePHD1_PHF6; Extended PHD finger 1 found in PHD finger protein 6 (PHF6)
      cl22851
      Location:213 → 281
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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