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    2-isopropylmalate synthase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828860, updated on 18-Sep-2024

    Summary

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    Official Full Name
    2-isopropylmalate synthase
    Primary source
    TAIR:AT4G27510
    Locus tag
    AT4G27510
    See related
    Araport:AT4G27510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F27G19.110; F27G19_110
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (13746176..13749131, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene proton pump interactor 1 Neighboring gene ncRNA Neighboring gene early nodulin-like protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001125598.1
    NM_118886.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    2-isopropylmalate synthase
    NP_001119070.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_194481.2
    • unknown protein; Has 25 Blast hits to 23 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13746176..13749131 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118886.4 → NP_194481.2  2-isopropylmalate synthase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194481.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UVU6, A0A7G2F1F6, Q5XV71

    2. NM_001125598.1 → NP_001119070.1  2-isopropylmalate synthase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119070.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2F1F6, B3H6U5
    Nucleotide Protein
    Heading Accession and Version

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