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Links from Protein Clusters

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    proline-rich family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840013, updated on 18-Sep-2024

    Summary

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    Official Full Name
    proline-rich family protein
    Primary source
    TAIR:AT1G31250
    Locus tag
    AT1G31250
    See related
    Araport:AT1G31250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T19E23.3; T19E23_3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (11166557..11167547, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Bromodomain transcription factor Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102863.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    proline-rich family protein
    NP_174410.2
    • proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 24580 Blast hits to 9370 proteins in 816 species: Archae - 67; Bacteria - 3086; Metazoa - 5006; Fungi - 2268; Plants - 4246; Viruses - 1015; Other Eukaryotes - 8892 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11166557..11167547 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102863.3 → NP_174410.2  proline-rich family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174410.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q58CN2, Q9SHF7
      Conserved Domains (1) summary
      cl10080
      Location:40 → 117
      RPE65; Retinal pigment epithelial membrane protein
    Nucleotide Protein
    Heading Accession and Version

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