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Links from Protein Clusters

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    hypothetical protein (DUF1985) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823060, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF1985)
    Primary source
    TAIR:AT3G32960
    Locus tag
    AT3G32960
    See related
    Araport:AT3G32960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (13499677..13500415)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase Neighboring gene RNA-binding KH domain-containing protein Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF1985)
    NP_189785.1
    • CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410); Has 115 Blast hits to 115 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      13499677..13500415
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114065.1 → NP_189785.1  hypothetical protein (DUF1985) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189785.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XHI5, F4JBG6
      Conserved Domains (1) summary
      pfam09331
      Location:51 → 107
      DUF1985; Domain of unknown function (DUF1985)
    Nucleotide Protein
    Heading Accession and Version

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