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Links from Protein Clusters

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    josephin protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837241, updated on 18-Sep-2024

    Summary

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    Official Full Name
    josephin protein-like protein
    Primary source
    TAIR:AT1G07300
    Locus tag
    AT1G07300
    See related
    Araport:AT1G07300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22G5.36; F22G5_36
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (2245693..2247240, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene golgi nucleotide sugar transporter 2 Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene ribosomal protein L4 Neighboring gene dentin sialophosphoprotein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100604.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    josephin protein-like protein
    NP_172210.1
    • josephin protein-related; BEST Arabidopsis thaliana protein match is: JOSEPHIN-like protein (TAIR:AT2G29640.1); Has 49 Blast hits to 49 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2245693..2247240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331689.1 → NP_001321587.1  josephin protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARC6, A0A5S9T2E7, A0A7G2DQS5

    2. NM_001331690.1 → NP_001321588.1  josephin protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARD0

    3. NM_100604.3 → NP_172210.1  josephin protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172210.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHQ4, A0A5S9T2E7, Q6NPG3
    Nucleotide Protein
    Heading Accession and Version

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