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Links from Protein Clusters

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    GALT1 galactosyltransferase1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839224, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GALT1
    Official Full Name
    galactosyltransferase1
    Primary source
    TAIR:AT1G26810
    Locus tag
    AT1G26810
    See related
    Araport:AT1G26810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    galactosyltransferase1; T24P13.20; T24P13_20
    Summary
    Encodes a protein with beta1,3-galactosyltransferase activity involved in the biosynthesis of the Lewis a epitope of certain glycoproteins.
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    Genomic context

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    See GALT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (9286643..9290096, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene RING/U-box superfamily protein Neighboring gene FBD domain family Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A unique beta1,3-galactosyltransferase is indispensable for the biosynthesis of N-glycans containing Lewis a structures in Arabidopsis thaliana. Strasser R, et al. Plant Cell, 2007 Jul. PMID 17630273, Free PMC Article
    2. Time-resolved fluorescence imaging reveals differential interactions of N-glycan processing enzymes across the Golgi stack in planta. Schoberer J, et al. Plant Physiol, 2013 Apr. PMID 23400704, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001332728.1
    NM_102445.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within Lewis a epitope biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    galactosyltransferase1
    NP_001319087.1
    • galactosyltransferase1 (GALT1); CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 2303 Blast hits to 2268 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 1677; Fungi - 5; Plants - 568; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9286643..9290096 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332728.1 → NP_001319087.1  galactosyltransferase1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7F9, Q9LQX1, W8Q3R0
      UniProtKB/TrEMBL
      A0A178WHF1, A0A5S9W1N4, A0A654EEP0
      Conserved Domains (1) summary
      PLN03133
      Location:1 → 642
      PLN03133; beta-1,3-galactosyltransferase; Provisional

    2. NM_102445.4 → NP_174003.1  galactosyltransferase1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174003.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7F9, Q9LQX1, W8Q3R0
      UniProtKB/TrEMBL
      A0A178WHF1, A0A5S9W1N4, A0A654EEP0
      Conserved Domains (1) summary
      PLN03133
      Location:1 → 642
      PLN03133; beta-1,3-galactosyltransferase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L7F9.1

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