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Links from Protein Clusters

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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832416, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT5G23510
    Locus tag
    AT5G23510
    See related
    Araport:AT5G23510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQM1.23; MQM1_23
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (7926945..7929387)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SWIB/MDM2, Plus-3 and GYF domain-containing protein Neighboring gene uncharacterized protein Neighboring gene smr (Small MutS Related) domain-containing protein Neighboring gene carboxyesterase 18 Neighboring gene KOW domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001125794.3
    NM_001343813.1
    NM_122258.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001119266.2
    • unknown protein; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_197742.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7926945..7929387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001125794.3 → NP_001119266.2  uncharacterized protein AT5G23510 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119266.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y6M0, A0A654G3H2, F4KCX6

    2. NM_001343813.1 → NP_001331605.1  uncharacterized protein AT5G23510 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UD09, A0A1P8BED8

    3. NM_122258.3 → NP_197742.2  uncharacterized protein AT5G23510 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197742.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q1ECD6, Q9LT12
    Nucleotide Protein
    Heading Accession and Version

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