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    LOC6539359 uncharacterized LOC6539359 [ Drosophila yakuba ]

    Gene ID: 6539359, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6539359
    Gene description
    uncharacterized LOC6539359
    Locus tag
    Dyak_GE19784
    See related
    EnsemblRapid:LOC6539359
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila yakuba
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GE19784; GE19784-PA; GE19784-PB
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6539359 in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 3L NC_052529.2 (18961675..18963895, complement)
    101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 3L NC_052529.1 (18961623..18963837, complement)

    Chromosome 3L - NC_052529.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122319566 Neighboring gene interaptin Neighboring gene Seminal fluid protein 78E Neighboring gene Amyotrophic lateral sclerosis 2 Neighboring gene ankyrin repeat and BTB/POZ domain-containing protein 2 Neighboring gene Cuticular protein 78E

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables potassium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyruvate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC6539359
    Names
    Dyak\GE19784
    Dyak\GE19784-PA
    Dyak\GE19784-PB
    dyak_GLEANR_3642

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Genomic

    1. NC_052529.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

      Range
      18961675..18963895 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002086201.4 → XP_002086237.2  uncharacterized protein LOC6539359 isoform X1

      UniProtKB/TrEMBL
      B4ITC5
      Related
      XP_002086237.2, XM_002086201.4
      Conserved Domains (2) summary
      pfam02887
      Location:492 → 594
      PK_C; Pyruvate kinase, alpha/beta domain
      cl39076
      Location:145 → 594
      Pyruvate_Kinase; Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low ...

    2. XM_015189703.2 → XP_015045189.1  uncharacterized protein LOC6539359 isoform X2

      UniProtKB/TrEMBL
      A0A0R1DYQ6
      Related
      XP_015045189.1, XM_015189703.2
      Conserved Domains (1) summary
      pfam02887
      Location:216 → 318
      PK_C; Pyruvate kinase, alpha/beta domain
    Nucleotide Protein Strain
    Heading Accession and Version

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