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    YIPF6 Yip1 domain family member 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713477, updated on 17-Aug-2024

    Summary

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    Official Symbol
    YIPF6provided by VGNC
    Official Full Name
    Yip1 domain family member 6provided by VGNC
    Primary source
    VGNC:VGNC:79698
    Locus tag
    EGK_20596
    See related
    Ensembl:ENSMMUG00000016986
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See YIPF6 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (65534402..65577405)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (63174643..63217866)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene oligophrenin 1 Neighboring gene akirin-1 pseudogene Neighboring gene nuclear distribution protein nudE-like 1 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L31 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein YIPF6
    Names
    YIP1 family member 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      65534402..65577405
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001102832.4 → XP_001102832.3  protein YIPF6 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q0I0, A0A5F8AMT8, A0A8J8YQ50, G7NRT0
      Related
      ENSMMUP00000079153.1, ENSMMUT00000097912.1
      Conserved Domains (1) summary
      cl21557
      Location:54 → 231
      Yip1; Yip1 domain

    2. XM_015127604.2 → XP_014983090.1  protein YIPF6 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q0I0
      Conserved Domains (1) summary
      cl21557
      Location:13 → 190
      Yip1; Yip1 domain
    Nucleotide Protein
    Heading Accession and Version

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