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    ELOC elongin C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698922, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ELOCprovided by VGNC
    Official Full Name
    elongin Cprovided by VGNC
    Primary source
    VGNC:VGNC:82139
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    TCEB1
    Orthologs
    human mouse all
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    Genomic context

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    See ELOC in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (74446781..74474005, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (72190271..72218427, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680277 Neighboring gene glycogenin-1-like Neighboring gene uncharacterized LOC106999817 Neighboring gene transmembrane protein 70 Neighboring gene lymphocyte antigen 96

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-macromolecule adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of elongin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongin-C
    Names
    transcription elongation factor B polypeptide 1
    transcription elongation factor B subunit 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001198677.1 → NP_001185606.1  elongin-C

      See identical proteins and their annotated locations for NP_001185606.1

      Status: VALIDATED

      Source sequence(s)
      CN805102
      UniProtKB/TrEMBL
      G7MZK3, I0FUL6
      Conserved Domains (1) summary
      cd18321
      Location:18 → 112
      BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      74446781..74474005 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145513.2 → XP_015000999.1  elongin-C isoform X1

      UniProtKB/TrEMBL
      G7MZK3, I0FUL6
      Conserved Domains (1) summary
      cd18321
      Location:18 → 112
      BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

    2. XM_015145516.2 → XP_015001002.1  elongin-C isoform X2

      UniProtKB/TrEMBL
      H9F3J1
      Conserved Domains (1) summary
      cd18321
      Location:2 → 96
      BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

    3. XM_028852144.1 → XP_028707977.1  elongin-C isoform X1

      UniProtKB/TrEMBL
      G7MZK3, I0FUL6
      Conserved Domains (1) summary
      cd18321
      Location:18 → 112
      BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

    4. XM_015145515.2 → XP_015001001.1  elongin-C isoform X1

      UniProtKB/TrEMBL
      G7MZK3, I0FUL6
      Conserved Domains (1) summary
      cd18321
      Location:18 → 112
      BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

    5. XM_015145514.2 → XP_015001000.1  elongin-C isoform X1

      UniProtKB/TrEMBL
      G7MZK3, I0FUL6
      Conserved Domains (1) summary
      cd18321
      Location:18 → 112
      BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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