U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    TCF12 transcription factor 12 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699626, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TCF12provided by VGNC
    Official Full Name
    transcription factor 12provided by VGNC
    Primary source
    VGNC:VGNC:78283
    See related
    Ensembl:ENSMMUG00000004091
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TCF12 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (33315517..33691333)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (33387989..33761966)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 280D Neighboring gene acyl-CoA-binding domain-containing protein 7 pseudogene Neighboring gene uncharacterized LOC114679413 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC100429309 Neighboring gene uncharacterized LOC114679414 Neighboring gene uncharacterized LOC114679415

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription factor 12

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      33315517..33691333
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850968.1 → XP_028706801.1  transcription factor 12 isoform X1

      UniProtKB/TrEMBL
      F6ZC50, F6ZC73, H9EME6
      Conserved Domains (1) summary
      cd18945
      Location:595 → 679
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    2. XM_028850969.1 → XP_028706802.1  transcription factor 12 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q700, A0A1D5QGF6, H9EME7
      Conserved Domains (1) summary
      cd18945
      Location:571 → 655
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    3. XM_015142321.2 → XP_014997807.1  transcription factor 12 isoform X6

      UniProtKB/TrEMBL
      A0A1D5Q700
      Conserved Domains (1) summary
      cd18945
      Location:537 → 621
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    4. XM_028850971.1 → XP_028706804.1  transcription factor 12 isoform X7

      UniProtKB/TrEMBL
      A0A1D5Q700
      Related
      ENSMMUP00000043816.2, ENSMMUT00000060593.2
      Conserved Domains (1) summary
      cd18945
      Location:513 → 597
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    5. XM_015142316.2 → XP_014997802.1  transcription factor 12 isoform X1

      UniProtKB/TrEMBL
      F6ZC50, F6ZC73, H9EME6
      Related
      ENSMMUP00000005474.3, ENSMMUT00000005812.4
      Conserved Domains (1) summary
      cd18945
      Location:595 → 679
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    6. XM_015142317.2 → XP_014997803.1  transcription factor 12 isoform X2

      UniProtKB/TrEMBL
      F6ZC50
      Conserved Domains (1) summary
      cd18945
      Location:594 → 678
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    7. XM_015142318.2 → XP_014997804.1  transcription factor 12 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q700, A0A1D5QGF6, H9EME7
      Related
      ENSMMUP00000047126.2, ENSMMUT00000055022.2
      Conserved Domains (1) summary
      cd18945
      Location:571 → 655
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    8. XM_015142319.2 → XP_014997805.1  transcription factor 12 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q700
      Conserved Domains (1) summary
      cd18945
      Location:570 → 654
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    9. XM_028850970.1 → XP_028706803.1  transcription factor 12 isoform X5

      UniProtKB/TrEMBL
      F6ZC50
      Related
      ENSMMUP00000005476.4, ENSMMUT00000005814.4
      Conserved Domains (1) summary
      smart00353
      Location:565 → 618
      HLH; helix loop helix domain

    10. XM_015142322.2 → XP_014997808.1  transcription factor 12 isoform X8

      UniProtKB/TrEMBL
      G7MXJ0
      Conserved Domains (1) summary
      cd18945
      Location:493 → 577
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    11. XM_015142325.2 → XP_014997811.1  transcription factor 12 isoform X11

      UniProtKB/TrEMBL
      G7MXJ0
      Conserved Domains (1) summary
      cd18945
      Location:400 → 484
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    12. XM_015142323.2 → XP_014997809.1  transcription factor 12 isoform X9

      UniProtKB/TrEMBL
      A0A1D5QS24, G7MXJ0
      Related
      ENSMMUP00000050852.2, ENSMMUT00000069301.2
      Conserved Domains (1) summary
      cd18945
      Location:425 → 509
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    13. XM_015142324.2 → XP_014997810.1  transcription factor 12 isoform X10

      UniProtKB/TrEMBL
      G7MXJ0
      Conserved Domains (1) summary
      cd18945
      Location:401 → 485
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.