U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    GVI51_F01881 Rab family GTPase SEC4 [ Nakaseomyces glabratus ]

    Gene ID: 2887974, updated on 6-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    GVI51_F01881
    Gene description
    Rab family GTPase SEC4
    Locus tag
    GVI51_F01881
    See related
    FungiDB:GVI51_F01881; VEuPathDB:GVI51_F01881
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GVI51_F01881 in Genome Data Viewer
    Location:
    chromosome: F
    Exon count:
    1
    Sequence:
    Chromosome: F; NC_088956.1 (235193..235840)

    Chromosome F - NC_088956.1Genomic Context describing neighboring genes Neighboring gene cohesin subunit SMC1 Neighboring gene uncharacterized protein Neighboring gene vacuolar transporter chaperone Neighboring gene MutS family protein MSH4

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_088956.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    • CAGL0F02123g
      Ortholog(s) have GTP binding, GTPase activity

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Rab family GTPase SEC4
    XP_446065.1
    • CAGL0F02123g
      Ortholog(s) have GTP binding, GTPase activity

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088956.1 Reference assembly

      Range
      235193..235840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_446065.1 → XP_446065.1  Rab family GTPase SEC4 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_446065.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O42819
      UniProtKB/TrEMBL
      A0A0W0DKC7
      Conserved Domains (1) summary
      cd01867
      Location:18 → 183
      Rab8_Rab10_Rab13_like; Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.