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    ASB8 ankyrin repeat and SOCS box containing 8 [ Calidris pugnax (ruff) ]

    Gene ID: 106898173, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ASB8
    Gene description
    ankyrin repeat and SOCS box containing 8
    See related
    Ensembl:ENSCPUG00000003205
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Calidris pugnax
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
    Orthologs
    human mouse all
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    Genomic context

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    See ASB8 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015091153.1 (8233..14321)

    NW_015091153.1Genomic Context describing neighboring genes Neighboring gene Ts translation elongation factor, mitochondrial Neighboring gene phosphofructokinase, muscle Neighboring gene SUMO specific peptidase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015091153.1 Unplaced Scaffold Reference ASM143184v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and SOCS box protein 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM143184v1

    Genomic

    1. NW_015091153.1 Reference ASM143184v1

      Range
      8233..14321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014959284.1 → XP_014814770.1  ankyrin repeat and SOCS box protein 8

      Related
      ENSCPUP00000004300.1, ENSCPUT00000005197.1
      Conserved Domains (5) summary
      cd00204
      Location:52 → 167
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd03727
      Location:241 → 283
      SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
      pfam12796
      Location:53 → 144
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:133 → 184
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:52 → 79
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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