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    LOC6640162 protein jim lovell [ Drosophila willistoni ]

    Gene ID: 6640162, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC6640162
    Gene description
    protein jim lovell
    Locus tag
    Dwil_GK21725
    See related
    EnsemblRapid:LOC6640162
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila willistoni
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GK21725; GK21725-PB
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6640162 in Genome Data Viewer
    Location:
    chromosome: 2L
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current UCI_dwil_1.1 (GCF_018902025.1) 2L Unlocalized Scaffold NW_025814048.1 (7962235..7973318, complement)
    101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032470.1 (1392406..1401694)

    NW_025814048.1Genomic Context describing neighboring genes Neighboring gene paired box protein gooseberry Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene ring finger protein goliath Neighboring gene glutamic acid-rich protein Neighboring gene uncharacterized LOC6640110

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein jim lovell
    Names
    Dwil\GK21725
    Dwil\GK21725-PB
    dwil_GLEANR_4824

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCI_dwil_1.1

    Genomic

    1. NW_025814048.1 Reference UCI_dwil_1.1

      Range
      7962235..7973318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047010237.1 → XP_046866193.1  protein jim lovell isoform X2

      UniProtKB/TrEMBL
      B4MPL7
      Related
      XP_046866193.1, XM_047010237.1

    2. XM_023182205.2 → XP_023037973.1  protein jim lovell isoform X1

      UniProtKB/TrEMBL
      B4MPL7
      Related
      XP_023037973.1, XM_023182205.2
      Conserved Domains (2) summary
      pfam05225
      Location:834 → 877
      HTH_psq; helix-turn-helix, Psq domain
      pfam00651
      Location:146 → 241
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version

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