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    MNEG_1142 hypothetical protein [ Monoraphidium neglectum ]

    Gene ID: 25728680, updated on 28-Dec-2023

    Summary

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    Gene symbol
    MNEG_1142
    Gene description
    hypothetical protein
    Locus tag
    MNEG_1142
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Monoraphidium neglectum (strain: SAG 48.87)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium
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    Genomic context

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    See MNEG_1142 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_014013519.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA (uracil-5-)-methyltransferase Neighboring gene Aquaporin PIP1-2 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_014013519.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. Bogen C, et al. BMC Genomics, 2013 Dec 28. PMID 24373495, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables large ribosomal subunit rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_014013519.1 Reference assembly

      Range
      4899..5252 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014050371.1 → XP_013905825.1  hypothetical protein MNEG_1142 [Monoraphidium neglectum]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D2NR52
      Conserved Domains (1) summary
      pfam00238
      Location:2 → 112
      Ribosomal_L14; Ribosomal protein L14p/L23e
    Nucleotide Protein
    Heading Accession and Version

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