U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC25500078 uncharacterized LOC25500078 [ Medicago truncatula (barrel medic) ]

    Gene ID: 25500078, updated on 22-Apr-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC25500078
    Gene description
    uncharacterized LOC25500078
    Locus tag
    MtrunA17_Chr8g0335671
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC25500078 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 8 NC_053049.1 (1177670..1182267, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 8 NC_016414.2 (1315949..1320551, complement)

    Chromosome 8 - NC_053049.1Genomic Context describing neighboring genes Neighboring gene patatin-like protein 1 Neighboring gene uncharacterized LOC25500077 Neighboring gene ELMO domain-containing protein B Neighboring gene SKP1-like protein 20

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Expression dynamics of the Medicago truncatula transcriptome during the symbiotic interaction with Sinorhizobium meliloti: which role for nitric oxide? Boscari A, et al. Plant Physiol, 2013 Jan. PMID 23136381, Free PMC Article
    2. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC25500078
    Names
    putative calycin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053049.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      1177670..1182267 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013588399.3 → XP_013443853.1  uncharacterized protein LOC25500078 isoform X2

      UniProtKB/TrEMBL
      A0A072TM35

    2. XM_013588400.3 → XP_013443854.1  uncharacterized protein LOC25500078 isoform X1

      UniProtKB/TrEMBL
      A0A072TK41
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases