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    yicJ putative xyloside transporter YicJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948168, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yicJ
    Official Full Name
    putative xyloside transporter YicJ
    Primary source
    ECOCYC:EG11686
    Locus tag
    b3657
    See related
    ASAP:ABE-0011953
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3647
    Summary
    YicJ is a possible sugar transporter for the YicI substrates. yicJ is possibly in a operon with downstream yicI. [More information is available at EcoGene: EG11686]. The YicJ protein is an uncharacterised member of the GPH family of galactose-pentose-hexuronide transporters . [More information is available at EcoCyc: EG11686].
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    Genomic context

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    Sequence:
    NC_000913.3 (3834547..3835929, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene AsmA family protein YicH Neighboring gene alpha-D-xyloside xylohydrolase Neighboring gene tRNA-Sec Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The yicJI metabolic operon of Escherichia coli is involved in bacterial fitness. Répérant M, et al. FEMS Microbiol Lett, 2011 Jun. PMID 21477255
    2. Cation and sugar selectivity determinants in a novel family of transport proteins. Poolman B, et al. Mol Microbiol, 1996 Mar. PMID 8830272
    3. Conserved and variable functions of the sigmaE stress response in related genomes. Rhodius VA, et al. PLoS Biol, 2006 Jan. PMID 16336047, Free PMC Article
    4. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212
    5. The major facilitator superfamily. Saier MH Jr, et al. J Mol Microbiol Biotechnol, 1999 Nov. PMID 10943556

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. YicJI operon is necessary for its fitness under all the growth conditions.
      Title: The yicJI metabolic operon of Escherichia coli is involved in bacterial fitness.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative xyloside transporter YicJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3834547..3835929 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418114.4 putative xyloside transporter YicJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418114.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6L7CIA1
      Conserved Domains (1) summary
      PRK11462
      Location:1 → 460
      PRK11462; putative transporter; Provisional
    Nucleotide Protein
    Heading Accession and Version

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