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    NimB5 Nimrod B5 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34815, updated on 9-Dec-2024

    Summary

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    Official Symbol
    NimB5provided by FlyBase
    Official Full Name
    Nimrod B5provided by FlyBase
    Primary source
    FLYBASE:FBgn0028936
    Locus tag
    Dmel_CG16873
    See related
    AllianceGenome:FB:FBgn0028936
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS00180.9; CG16873; Dmel\CG16873; nimB5
    Summary
    Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See NimB5 in Genome Data Viewer
    Location:
    34E5-34E5; 2-50 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13970177..13972173)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13970177..13972173)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Nimrod B3 Neighboring gene Nimrod B4 Neighboring gene Hemese Neighboring gene Nimrod C1 Neighboring gene Cytochrome P450 28a5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GeneID in Drosophila. Parra G, et al. Genome Res, 2000 Apr. PMID 10779490, Free PMC Article
    2. Evolution of genes and repeats in the Nimrod superfamily. Somogyi K, et al. Mol Biol Evol, 2008 Nov. PMID 18703524
    3. A secreted factor NimrodB4 promotes the elimination of apoptotic corpses by phagocytes in Drosophila. Petrignani B, et al. EMBO Rep, 2021 Sep 6. PMID 34370384, Free PMC Article
    4. Nimrod, a putative phagocytosis receptor with EGF repeats in Drosophila plasmatocytes. Kurucz E, et al. Curr Biol, 2007 Apr 3. PMID 17363253
    5. Dual proteomics of Drosophila melanogaster hemolymph infected with the heritable endosymbiont Spiroplasma poulsonii. Masson F, et al. PLoS One, 2021. PMID 33914801, Free PMC Article

    See all (47) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The adipokine NimrodB5 regulates peripheral hematopoiesis in Drosophila.
      Title: The adipokine NimrodB5 regulates peripheral hematopoiesis in Drosophila.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in phagocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    nimrod B5
    Names
    CG16873-PA
    CG16873-PB
    CG16873-PC
    NimB5-PA
    NimB5-PB
    NimB5-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13970177..13972173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298990.1 → NP_001285919.1  nimrod B5, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285919.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q29QQ3, Q9NKD9, Q9VJU6

    2. NM_001201873.2 → NP_001188802.1  nimrod B5, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188802.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q29QQ3, Q9NKD9, Q9VJU6

    3. NM_135848.5 → NP_609692.3  nimrod B5, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609692.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q29QQ3, Q9NKD9, Q9VJU6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VJU6 Q9VJU6

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