U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    abracl ABRA C-terminal like [ Danio rerio (zebrafish) ]

    Gene ID: 336650, updated on 9-Dec-2024

    Summary

    Official Symbol
    abraclprovided by ZNC
    Official Full Name
    ABRA C-terminal likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-8594
    See related
    Ensembl:ENSDARG00000042876 AllianceGenome:ZFIN:ZDB-GENE-030131-8594
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    PRO2013; c6orf115; wu:fa91c10; wu:fb38c09; zgc:113923; si:dkey-34f16.3
    Summary
    Predicted to be involved in regulation of actin filament-based process. Orthologous to human ABRACL (ABRA C-terminal like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See abracl in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (36812335..36818195)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (36909456..36915316)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene peptidyl-tRNA hydrolase domain containing 1 Neighboring gene solute carrier family 25 member 27 Neighboring gene hdc homolog, cell cycle regulator Neighboring gene taxilin beta a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    costars family protein ABRACL
    Names
    ABRA C-terminal-like protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213642.2NP_998807.1  costars family protein ABRACL

      See identical proteins and their annotated locations for NP_998807.1

      Status: VALIDATED

      Source sequence(s)
      BC081586, BX248390
      UniProtKB/Swiss-Prot
      Q6TGV7
      Related
      ENSDARP00000062930.3, ENSDART00000062931.5
      Conserved Domains (1) summary
      pfam14705
      Location:278
      Costars; Costars

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      36812335..36818195
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)