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    LOC110671412 DELLA protein GAI [ Hevea brasiliensis (rubber tree) ]

    Gene ID: 110671412, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC110671412
    Gene description
    DELLA protein GAI
    Locus tag
    P3X46_016168
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hevea brasiliensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
    Also known as
    RGL1
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    Genomic context

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    See LOC110671412 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 9 NC_079501.1 (19472767..19475063)
    100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018746165.1 (153548..155768, complement)

    Chromosome 9 - NC_079501.1Genomic Context describing neighboring genes Neighboring gene geranylgeranyl pyrophosphate synthase 7, chloroplastic Neighboring gene glutathione S-transferase DHAR3, chloroplastic Neighboring gene uncharacterized LOC110671425 Neighboring gene uncharacterized LOC110671380

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the rubber tree Hevea brasiliensis. Rahman AY, et al. BMC Genomics, 2013 Feb 2. PMID 23375136, Free PMC Article
    2. Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids. Li D, et al. Sci Rep, 2016 Apr 25. PMID 27108962, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hyperosmotic salinity response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in jasmonic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of gibberellic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of seed germination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of reactive oxygen species metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of seed dormancy process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to abscisic acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to ethylene IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in salicylic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DELLA protein GAI
    Names
    DELLA protein RGL1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3005281v1 Primary Assembly

    Genomic

    1. NC_079501.1 Reference ASM3005281v1 Primary Assembly

      Range
      19472767..19475063
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021833884.2 → XP_021689576.2  DELLA protein GAI

      UniProtKB/TrEMBL
      A0A6A6L4Q6
    Nucleotide Protein
    Heading Accession and Version

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