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    CC2D1A coiled-coil and C2 domain containing 1A [ Cercocebus atys (sooty mangabey) ]

    Gene ID: 105601569, updated on 13-Mar-2024

    Summary

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    Gene symbol
    CC2D1A
    Gene description
    coiled-coil and C2 domain containing 1A
    See related
    Ensembl:ENSCATG00000040032
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cercocebus atys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
    Orthologs
    human mouse all
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    Genomic context

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    See CC2D1A in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012002842.1 (4479966..4504324)

    NW_012002842.1Genomic Context describing neighboring genes Neighboring gene zinc finger SWIM-type containing 4 Neighboring gene nanos C2HC-type zinc finger 3 Neighboring gene break repair meiotic recombinase recruitment factor 1 Neighboring gene podocan like 1 Neighboring gene DDB1 and CUL4 associated factor 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012002842.1 Unplaced Scaffold Reference Caty_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil and C2 domain-containing protein 1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Caty_1.0

    Genomic

    1. NW_012002842.1 Reference Caty_1.0

      Range
      4479966..4504324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012094110.1 → XP_011949500.1  coiled-coil and C2 domain-containing protein 1A isoform X8

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Related
      ENSCATP00000034227.1, ENSCATT00000058503.1
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:652 → 809
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    2. XM_012094102.1 → XP_011949492.1  coiled-coil and C2 domain-containing protein 1A isoform X1

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:652 → 809
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    3. XM_012094108.1 → XP_011949498.1  coiled-coil and C2 domain-containing protein 1A isoform X6

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:652 → 809
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    4. XM_012094104.1 → XP_011949494.1  coiled-coil and C2 domain-containing protein 1A isoform X3

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:652 → 809
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    5. XM_012094109.1 → XP_011949499.1  coiled-coil and C2 domain-containing protein 1A isoform X7

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:652 → 809
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    6. XM_012094111.1 → XP_011949501.1  coiled-coil and C2 domain-containing protein 1A isoform X9

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:652 → 809
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    7. XM_012094112.1 → XP_011949502.1  coiled-coil and C2 domain-containing protein 1A isoform X10

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:611 → 768
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    8. XM_012094103.1 → XP_011949493.1  coiled-coil and C2 domain-containing protein 1A isoform X2

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:651 → 808
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    9. XM_012094105.1 → XP_011949495.1  coiled-coil and C2 domain-containing protein 1A isoform X4

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:648 → 805
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

    10. XM_012094106.1 → XP_011949496.1  coiled-coil and C2 domain-containing protein 1A isoform X5

      UniProtKB/TrEMBL
      A0A2K5N9Q7
      Conserved Domains (2) summary
      smart00685
      Location:349 → 407
      DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
      cd08690
      Location:647 → 804
      C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)
    Nucleotide Protein
    Heading Accession and Version

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